Job Description O13535 Confidence 92.66% Date Mon Jul 2 19:10:10 BST 2012 Rank 56 Aligned Residues 77 % Identity 19% Template d1hvca_ SCOP info Acid proteases Acid proteases Retroviral protease (retropepsin) Resolution 1.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

497

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500

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510

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520

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530

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540

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550

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560

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570

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.

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.

Predicted Secondary structure

Query SS confidence

Query Sequence

L

L

D

S

G

A

S

R

T

L

I

R

S

A

H

H

I

H

S

A

S

S

N

P

D

I

N

V

V

D

A

Q

K

R

N

I

P

I

N

A

I

G

D

L

Q

F

H

F

Q

D

N

T

K

T

S

I

K

V

L

H

T

P

N

I

A

Y

D

L

L

S

L

N

E

L

A

A

V

D

I

T

Query Conservation

Alig confidence

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Template Conservation

.

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Template Sequence

L

L

D

T

G

A

D

D

T

V

L

E

E

M

N

L

P

G

K

W

K

P

.

.

.

.

K

M

I

G

G

I

G

G

F

I

K

V

R

Q

Y

D

Q

I

L

I

E

I

C

G

H

K

A

I

G

T

.

V

L

V

G

P

.

T

P

V

N

I

I

G

R

N

L

L

T

Q

I

G

C

T

Template Known Secondary structure

T

T

S

S

S

S

.

.

.

.

T

T

T

T

.

S

.

S

S

G

G

G

T

Template Predicted Secondary structure

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.

Template SS confidence

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions