Job Description O13535 Confidence 99.87% Date Mon Jul 2 19:10:10 BST 2012 Rank 13 Aligned Residues 139 % Identity 14% Template d1exqa_ SCOP info Ribonuclease H-like motif Ribonuclease H-like Retroviral integrase, catalytic domain Resolution 1.60

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		700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	P	F	Q	Y	L	H	T	D	I	F	G	P	V	H	N	L	P	K	S	A	P	S	Y	F	I	S	F	T	D	E	T	T	K	F	R	W	V	Y	P	L	H	D	R	R	E	D	S	I	L	D	V	F	T	T	I	L	A	F	I	K	N	Q	F	Q	A	S	V	L	V	I	Q	M	D	R	G	S	E	Y
Query Conservation
Alig confidence						.								.	.	.	.	.	.	.																																											.	.	.	.	.	.
Template Conservation						.								.	.	.	.	.	.	.																																											.	.	.	.	.	.
Template Sequence		S	S	P	G	.	I	W	Q	L	D	C	T	.	.	.	.	.	.	.	H	L	E	G	K	V	I	L	V	A	V	H	V	A	S	G	Y	I	E	A	E	V	I	P	A	E	T	G	Q	E	T	A	Y	F	L	L	K	L	A	G	R	W	.	.	.	.	.	.	P	V	K	T	I	H	T	D	N	G	S	N	F
Template Known Secondary structure			G	G	G	.								.	.	.	.	.	.	.			T	T									T	T	T	T								S	S	S	S															S	.	.	.	.	.	.											G	G	G
Template Predicted Secondary structure						.								.	.	.	.	.	.	.																																											.	.	.	.	.	.
Template SS confidence
		56	.	.	.		60	.	.	.	.	.	.								.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.							.	110	.	.	.	.	.	.	.	.	.	120	.
		780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.		.	.	.	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		T	N	R	T	L	H	K	F	L	E	K	N	G	I	T	P	C	Y	T	T	T	A	D	S	R	A	H	G	V	A	E	R	L	N	R	T	L	L	D	D	C	R	T	Q	L	Q	C	S	G	L	P	N	H	L	W	F	S	A	I	E	F	S	T	I	V	R	N	S	L	A	S	P	K	S	K	.	K	S	A	R
Query Conservation																																																																													.
Alig confidence																								.	.	.	.	.	.	.																						.	.	.	.																						.
Template Conservation																								.	.	.	.	.	.	.																						.	.	.	.
Template Sequence		T	G	A	T	V	R	A	A	C	D	W	A	G	I	K	Q	E	D	G	I	P	Y	.	.	.	.	.	.	.	V	E	S	M	N	K	E	L	K	K	I	I	G	Q	V	R	D	Q	A	E	H	.	.	.	.	L	K	T	A	V	Q	M	A	V	F	I	H	N	K	K	R	K	G	G	I	G	G	Y	S	A	G
Template Known Secondary structure		T	S											T					S					.	.	.	.	.	.	.			S	S												G	G	G		S	S	.	.	.	.																	S	S	S	S	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.																						.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.								.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.					.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		859	860	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	H	A	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	R	I	V	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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