Job Description O13535 Confidence 88.32% Date Mon Jul 2 19:10:10 BST 2012 Rank 58 Aligned Residues 93 % Identity 24% Template c2rpiA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:ribonuclease h; PDBTitle: the nmr structure of the submillisecond folding2 intermediate of the thermus thermophilus ribonuclease h Resolution UNK

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		1638	.	1640	.	.	.	.	.	.	.	.	.	1650	.	.	.	.	.	.	.	.	.	1660	.	.	.	.	.	.	.	.	.	1670	.	.	.	.	.	.	.	.	.	1680	.	.	.	.	.	.	.	.	.	1690	.	.	.	.	.	.	.	.	.	1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	D	N	K	L	V	A	I	S	D	A	S	Y	G	N	Q	P	Y	Y	K	S	Q	I	G	N	I	Y	L	L	N	G	K	V	I	G	G	K	S	T	K	A	S	L	T	C	T	S	T	T	E	A	E	I	H	A	I	S	E	S	V	P	L	L	N	N	L	S	H	L	V	Q	E	L	N	K	K	P	I	T
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	P	R	K	R	V	A	L	F	T	D	G	A	A	L	G	N	P	G	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	N	N	R	M	E	L	K	A	A	I	E	G	L	K	A	L	.	.	.	.	.	.	.	.	.	.	.	K	E	P	A	E
Template Known Secondary structure		S	S	S			B			B								S	S		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T																T	T	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.																										.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.												.	.	.	.	.
		1718	.	1720	.	.	.	.	.	.	.	.	.	1730	.	.	.									.	.	.	.	.	.	1740	.	.	.	.	.	.	.			.	.	1750	.	.	.	.	.	.	.	.	.	1760	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.															.	.
Query SS confidence																		.	.	.	.	.	.	.	.															.	.
Query Sequence		K	G	L	L	T	D	S	K	S	T	I	S	I	I	I	S	.	.	.	.	.	.	.	.	N	N	E	E	K	F	R	N	R	F	F	G	T	K	.	.	A	M	R	L	R	D	E	V	S	G	N	H	L	H	V	C	Y	I	E
Query Conservation																		.	.	.	.	.	.	.	.															.	.
Alig confidence																		.	.	.	.	.	.	.	.															.	.
Template Conservation
Template Sequence		V	D	L	Y	T	D	S	H	Y	L	K	K	A	F	T	E	G	W	L	E	G	W	R	K	R	G	W	R	T	A	E	G	K	P	V	K	N	R	D	L	W	E	A	L	L	L	A	M	A	P	H	R	V	R	F	H	F	V	K
Template Known Secondary structure		B							T	T							T		T							T	T	S	B		S	S	S	S	B		T	T											T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions