Job Description O13535 Confidence 97.72% Date Mon Jul 2 19:10:10 BST 2012 Rank 30 Aligned Residues 125 % Identity 15% Template c2qkkI_ PDB info PDB header:hydrolase/dna/rna Chain: I: PDB Molecule:ribonuclease h1; PDBTitle: human rnase h catalytic domain mutant d210n in complex with2 14-mer rna/dna hybrid Resolution 3.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1643	.	.	.	.	.	.	1650	.	.	.	.	.	.	.	.	.	1660	.	.	.	.	.	.	.	.	.	1670	.	.	.	.	.	.	.	.	.	1680	.	.	.	.	.	.	.	.	.	1690	.	.	.	.	.	.	.	.	.	1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	A	I	S	D	A	S	Y	G	N	Q	P	Y	Y	K	S	Q	I	G	N	I	Y	L	L	N	G	K	V	I	G	G	K	S	T	K	A	S	L	T	C	T	S	T	T	E	A	E	I	H	A	I	S	E	S	V	P	L	L	N	N	L	S	H	L	V	Q	E	L	N	K	K	P	I	T	K	G	L	L	T
Query Conservation
Alig confidence																																													.																.	.	.	.	.	.	.	.	.
Template Conservation																																													.																.	.	.	.	.	.	.	.	.
Template Sequence		V	V	V	Y	T	D	G	C	C	S	S	N	G	R	R	R	P	R	A	G	I	G	V	Y	W	G	P	G	H	P	L	N	V	G	I	R	L	P	G	R	Q	T	N	.	Q	R	A	E	I	H	A	A	C	K	A	I	E	Q	A	.	.	.	.	.	.	.	.	.	K	T	Q	N	I	N	K	L	V	L	Y	T
Template Known Secondary structure												T	S	S	S	S	S										S	T	T		T	T		B						S	S				.																.	.	.	.	.	.	.	.	.		T	T	T
Template Predicted Secondary structure																																													.																.	.	.	.	.	.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.										.	.	200	.	.	.	.	.	.	.	.	.
		1723	.	.	.	.	.	.	1730	.	.	.									.	.	.	.		.	.	1740	.	.	.	.	.	.	.	.	.	1750	.	.	.	.	.	.	.	.	.	1760	.	.	.	.	.	.	.	.	.						1770	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.					.																																	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.					.																																	.	.	.	.	.
Query Sequence		D	S	K	S	T	I	S	I	I	I	S	.	.	.	.	.	.	.	.	N	N	E	E	.	K	F	R	N	R	F	F	G	T	K	A	M	R	L	R	D	E	V	S	G	N	H	L	H	V	C	Y	I	E	T	K	K	.	.	.	.	.	N	I	A	D	V	M	T	K
Query Conservation													.	.	.	.	.	.	.	.					.																																	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.					.																																	.	.	.	.	.
Template Conservation
Template Sequence		N	S	M	F	T	I	N	G	I	T	N	W	V	Q	G	W	K	K	N	G	W	K	T	S	A	G	K	E	V	I	N	K	E	D	F	V	A	L	E	R	L	T	Q	G	M	D	I	Q	W	M	H	V	P	G	H	S	G	F	I	G	N	E	E	A	D	R	L	A	R
Template Known Secondary structure											T	T									T	S	B		T	T	S	S	B		S											T	T	T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions