Job Description O13535 Confidence 97.52% Date Mon Jul 2 19:10:10 BST 2012
Rank 31 Aligned Residues 124
% Identity 19% Template c2kq2A_
PDB info
PDB header: hydrolaseChain: A: PDB Molecule: ribonuclease h-related protein;
PDBTitle: solution nmr structure of the apo form of a ribonuclease h2 domain of protein dsy1790 from desulfitobacterium3 hafniense, northeast structural genomics target dhr1a
Resolution UNK
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
1637 . . 1640 . . . . . . . . . 1650 . . . . . . . . . 1660 . . . . . . . . . 1670 . . . . . . . . . 1680 . . . . . . .
. . 1690 . . . . . . . . . 1700 . . . . . . . . . 1710 . . .
Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
T E P D N K L V A I S D A S Y G N Q P Y Y K S Q I G N I Y L L N G K V I G G K S T K A S L T C T S T T .
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E A E I H A I S E S V P L L N N L S H L V Q E L N K
Query Conservation  
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Alig confidence  
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Template Conservation  
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Template Sequence  
M D D R T E Y D V Y T D G S Y .
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V N G Q Y A W A Y A F V K D G K V H Y E D A D V G K N P A A A T M R N V A G E I A A A L Y A V K K A S Q L .
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Template Known Secondary structure  
T T S . . . B T T B T T G G G G G T T T . . . . . . . . .
Template Predicted Secondary structure  
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Template SS confidence  
   
1 . . . . . . . . 10 . . . . .
. . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . .
 
   
1714 . . . . . 1720 . . . . . . . . . 1730 . . . . . . . . . 1740 . . . . . . . . . 1750 . . . . . . . . . 1760 . . . . . . . . . 1770 .
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Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
K P I T K G L L T D S K S T I S I I I S N N E E K F R N R F F G T K A M R L R D E V S G N H L H V C Y I E T K K N I .
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A D V M T K
Query Conservation  
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Alig confidence  
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Template Conservation  
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Template Sequence  
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G V K I R I L H D Y A G I A F W A .
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T G E W K A K N E F T Q A Y A K L M N Q Y .
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R G I Y S F E K V K A H S G N E F N D Y V D M K A K
Template Known Secondary structure  
. T B S S S T T . . T S S S S G G G G G . . S T T B
Template Predicted Secondary structure  
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Template SS confidence  
   
69 70 . . . . . . . . . 80 . . . . .
. . . . 90 . . . . . . . . . 100 . . . . . .
. . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]