Return to main results Retrieve Phyre Job Id

Job DescriptionO13535
Confidence97.52%DateMon Jul 2 19:10:10 BST 2012
Rank31Aligned Residues124
% Identity19%Templatec2kq2A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:ribonuclease h-related protein; PDBTitle: solution nmr structure of the apo form of a ribonuclease h2 domain of protein dsy1790 from desulfitobacterium3 hafniense, northeast structural genomics target dhr1a
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1637..1640.........1650.........1660.........1670.........1680....... ..1690.........1700.........1710...
Predicted Secondary structure 

























...


Query SS confidence 


















































. . .

























Query Sequence  TEPDNKLVAISDASYGNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTT. . . EAEIHAISESVPLLNNLSHLVQELNK
Query Conservation        
  




 
   








  
 
  


 



  

 


...



 


 
 

  

  

 


 
Alig confidence 














...
































...
















.........
Template Conservation          





 ...     
 
  
                      

  


 

  

      .........
Template Sequence  MDDRTEYDVYTDGSY. . . VNGQYAWAYAFVKDGKVHYEDADVGKNPAAATMRNVAGEIAAALYAVKKASQL. . . . . . . . .
Template Known Secondary structure 

TTS






...BTTB
TT


GGGGGT
TT.........
Template Predicted Secondary structure 








...
















.........
Template SS confidence 















































































   1........10..... ....20.........30.........40.........50.........60........
 
   1714.....1720.........1730.........1740.........1750.........1760.........1770. ......
Predicted Secondary structure 
























.....





Query SS confidence 

























































. . . . .





Query Sequence  KPITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEVSGNHLHVCYIETKKNI. . . . . ADVMTK
Query Conservation        
 






  
  

  
 






  
 


 
  
 
 
  
 
    .....

 


Alig confidence  .
















..




















..














.....





Template Conservation  .   
 
 


  
    ..                     ..   
    
  
     
  

 


Template Sequence  . GVKIRILHDYAGIAFWA. . TGEWKAKNEFTQAYAKLMNQY. . RGIYSFEKVKAHSGNEFNDYVDMKAK
Template Known Secondary structure  .T



BSS

STT..TSSSS


GGGGG..STT

B








Template Predicted Secondary structure  .




..







..









Template SS confidence 




































































   6970.........80..... ....90.........100...... ...110.........120.........130..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions