Job Description O13535 Confidence 48.66% Date Mon Jul 2 19:10:10 BST 2012 Rank 66 Aligned Residues 83 % Identity 17% Template c2i1aC_ PDB info PDB header:protein turnover Chain: C: PDB Molecule:dna damage-inducible protein ddi1; PDBTitle: a retroviral protease-like domain in the eukaryotic protein2 ddi1 Resolution 2.30 Å

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		497	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	D	S	G	A	S	R	T	L	I	R	S	A	H	H	I	H	S	A	S	S	N	P	D	I	N	V	V	D	A	Q	K	R	N	I	P	I	N	A	I	G	D	L	Q	F	H	F	Q	D	N	T	K	T	S	I	K	V	L	H	T	P	N	I	A	Y	D	L	L	S	L	N	E	L	A	A	V	D	I	T
Query Conservation
Alig confidence													.																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	V	D	T	G	A	Q	T	T	I	M	.	S	T	R	L	A	K	K	T	G	L	S	R	M	I	D	I	G	R	I	H	Q	A	Q	V	K	I	.	.	.	.	.	.	.	.	.	.	.	E	T	Q	Y	I	P	C	S	F	T	V	L	D	T	D	I	D	V	L	I	G	L	D	M	L	K	R	H	L	A	C
Template Known Secondary structure					T	T		S	S				.								T	T		G	G	G														.	.	.	.	.	.	.	.	.	.	.	T	T											S		S	S	S											T	T
Template Predicted Secondary structure													.																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.												.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		577	.	.	580	.	.	.	.	.	.	.	.	.	590	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	C	F	T	K	N	V	L	E	R	S	D	G	T	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	L	K	E	N	V	L	R	I	A	E	V	E	T
Template Known Secondary structure				T	T	T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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