Return to main results Retrieve Phyre Job Id

Job DescriptionO13535
Confidence25.58%DateMon Jul 2 19:10:10 BST 2012
Rank70Aligned Residues29
% Identity3%Templatec2csdB_
PDB info PDB header:isomeraseChain: B: PDB Molecule:topoisomerase v; PDBTitle: crystal structure of topoisomerase v (61 kda fragment)
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   633......640.... .....650.........660.
Predicted Secondary structure 



.






Query SS confidence 











.
















Query Sequence  YPFIHRMLAHAN. AQTIRYSLKNNTITYFN
Query Conservation     

 



  .   
  
     
    
Alig confidence 











.
















Template Conservation 

 





 







 


 






Template Sequence  AERLLRAFGNPERVKQLAREFEIEKLASVE
Template Known Secondary structure  SST
TTST
Template Predicted Secondary structure 











Template SS confidence 





























   424.....430.........440.........450...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions