04/07/2012 06:30:54 : INFO  : Run start: Wed Jul  4 06:30:54 BST 2012
04/07/2012 06:30:54 : INFO  : Initialised job
04/07/2012 06:30:54 : INFO  : Initialised job:
Sequence
>batch____
MRATTLLSSVVSLALLSKEVLATPPACLLACVAQVGKSSSTCDSLNQVTCYCEHENSAVK
KCLDSICPNNDADAAYSAFKSSCSEQNASLGDSSSSASSSASSSSKASSSTKASSSSASS
STKASSSSASSSTKASSSSAAPSSSKASSTESSSSSSSSTKAPSSEESSSTYVSSSKQAS
STSEAHSSSAASSTVSQETVSSALPTSTAVISTFSEGSGNVLEAGKSVFIAAVAAMLI

04/07/2012 06:30:54 : INFO  : Checked sequence
04/07/2012 06:30:54 : INFO  : Finding homologues with PSI-BLAST
04/07/2012 06:30:54 : INFO  : PSI-BLAST 3 iterations
04/07/2012 06:33:59 : INFO  : PSI-BLAST 5 iterations
04/07/2012 06:41:37 : INFO  : Finished PSI-BLAST
04/07/2012 06:41:37 : INFO  : Running Buildali to generate a3m file
04/07/2012 06:52:21 : INFO  : Converting to HMM
04/07/2012 06:52:22 : INFO  : Calibrating HMM
04/07/2012 06:52:27 : INFO  : Searching HMM database
04/07/2012 06:58:22 : INFO  : Finished buildali
04/07/2012 06:58:22 : INFO  : Predicting secondary structure
04/07/2012 06:58:23 : INFO  : Predicted secondary structure (PSI-Pred)
04/07/2012 06:58:23 : INFO  : Predicting Disordered regions
04/07/2012 06:58:23 : INFO  : Predicted Disorder (Disopred)
04/07/2012 06:58:23 : INFO  : Running memsat_svm check
04/07/2012 13:39:28 : INFO  : Globular protein
04/07/2012 13:39:28 : INFO  : Predicted Transmembrane (memsat_svm) ID 'b38790c04c3003d5'
04/07/2012 13:39:28 : INFO  : Initialising fold library search
04/07/2012 13:39:28 : INFO  : Initialised search input
04/07/2012 13:39:28 : INFO  : Building Ensemble models
04/07/2012 13:39:28 : INFO  : Building hh.c3dvmB_.model.1.pdb
04/07/2012 13:39:28 : INFO  : Building c3dvmB_.1.pdb
04/07/2012 13:39:29 : INFO  : Building c3dvkB_.2.pdb
04/07/2012 13:39:29 : INFO  : Building c3omyB_.3.pdb
04/07/2012 13:39:29 : INFO  : Building c3j1rP_.4.pdb
04/07/2012 13:39:30 : INFO  : Building c3j1rM_.5.pdb
04/07/2012 13:39:30 : INFO  : Building c3j1rR_.6.pdb
04/07/2012 13:39:30 : INFO  : Building c3j1rD_.7.pdb
04/07/2012 13:39:31 : INFO  : Building c3j1rC_.8.pdb
04/07/2012 13:39:31 : INFO  : Building c3j1rQ_.9.pdb
04/07/2012 13:39:31 : INFO  : Building c3j1rI_.10.pdb
04/07/2012 13:39:32 : INFO  : Building c3j1rB_.11.pdb
04/07/2012 13:39:32 : INFO  : Building c3j1rG_.12.pdb
04/07/2012 13:39:32 : INFO  : Building c3j1rH_.13.pdb
04/07/2012 13:39:33 : INFO  : Building c3j1rN_.14.pdb
04/07/2012 13:39:33 : INFO  : Building c3j1rO_.15.pdb
04/07/2012 13:39:34 : INFO  : Building c3j1rE_.16.pdb
04/07/2012 13:39:34 : INFO  : Building c3j1rS_.17.pdb
04/07/2012 13:39:34 : INFO  : Building c3j1rL_.18.pdb
04/07/2012 13:39:34 : INFO  : Building c3j1rF_.19.pdb
04/07/2012 13:39:35 : INFO  : Building c3j1rA_.20.pdb
04/07/2012 13:39:36 : INFO  : Finished HH model building
04/07/2012 13:39:36 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
04/07/2012 13:39:40 : INFO  : html domain output complete ID 'b38790c04c3003d5'
04/07/2012 13:39:44 : INFO  : Run end  : Wed Jul  4 13:39:44 BST 2012
