Return to main results Retrieve Phyre Job Id

Job DescriptionP38822
Confidence82.35%DateMon Jul 2 19:20:36 BST 2012
Rank249Aligned Residues199
% Identity15%Templated2d4ca1
SCOP infoBAR/IMD domain-like BAR/IMD domain-like BAR domain
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.. .......50.........60.........70.........80..
Predicted Secondary structure  .....







Query SS confidence 


































. . . . .







































Query Sequence  GNEIKDSFKETHKWVQNNLKWLKDIEQFYRERAKL. . . . . EKDYSERLSRLSAEYFNKKSSTSVPISVGDTPTTTPGSIE
Query Conservation     
                          


 
.....
 

   
  
                             
Alig confidence 


































.....
















...............







Template Conservation 

 

 

   
            
 
                       
   
  ...............        
Template Sequence  GTKLDDDFKEMERKVDVTSRAVMEIMTKTIEYLQPNPASRAKLYPQAEALLAEAMLK. . . . . . . . . . . . . . . FGRELGDD
Template Known Secondary structure 

SGGG
S




...............
SS
Template Predicted Secondary structure 






...............





Template SS confidence 















































































   26...30.........40.........50.........60.........70.........80.. .......90
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
Predicted Secondary structure 
Query SS confidence 















































































Query Sequence  AAGVVAWNEILSQTDMISKDHDQLSTDFENHVANQLSGLFTKLDMTLSKINGFNNDMVNKKDNIYHELEKAKKDYDEACS
Query Conservation                             
       
       
   
                                
Alig confidence 






































.................























Template Conservation        
   
     
          
      

   .................
  
            
  
  
 
Template Sequence  CNFGPALGEVGEAMRELSEVKDSLDIEVKQNFIDPLQNL. . . . . . . . . . . . . . . . . HDKDLREIQSALQHHLKKLEGRRL
Template Known Secondary structure  SST.................T
Template Predicted Secondary structure 
.................
Template SS confidence 















































































   108.110.........120.........130.........140...... ...150.........160.........170
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
Predicted Secondary structure 
Query SS confidence 















































































Query Sequence  TMEMARNRYTKASNDRNKKKLDEKEMEMNKCKNEYLIKINQANRTKDKYYFQDVPEVLDLLQDVNEAKTLFLNDLWLKAA
Query Conservation                                                              
          
        
Alig confidence 









....




































.



























Template Conservation    
  
 
  ....   
 
   
   

         
  
         . 
     

  
       
  
   

Template Sequence  DFDYKKKRQG. . . . KIPDEELRQALEKFDESKEIAESSMFNLLEMDIEQVS. QLSALVQAQLEYHKQAVQILQQVTVRLE
Template Known Secondary structure  S....S

.
Template Predicted Secondary structure  .....
Template SS confidence 















































































   171........180 .........190.........200.........210....... ..220.........230.........240.....
 
   243
Predicted Secondary structure 
Query SS confidence 
Query Sequence  S
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  E
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   246
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions