Return to main results Retrieve Phyre Job Id

Job DescriptionP38822
Confidence69.56%DateMon Jul 2 19:20:36 BST 2012
Rank261Aligned Residues202
% Identity12%Templated1urua_
SCOP infoBAR/IMD domain-like BAR/IMD domain-like BAR domain
Resolution2.6

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80........
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Query Sequence  NEIKDSFKETHKWVQNNLKWLKDIEQFYRERAKLEKDYSERLSRLSAEYFNKKSSTSVPISVGDTPTTTPGSIEAAGVVA
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Template Sequence  DDHLNNFNRQQASANRLQKEFNNYIRCVRAAQAASKTLXDSVCEIYE. . . . . . . . . . . . . . . . . . . . . . . . . . . . PQWSG
Template Known Secondary structure  S
............................TTSTT
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   40.........50.........60.........70.........80...... ...90.
 
   8990.........100.........110.........120.........130.........140.........150.........160........
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Query Sequence  WNEILSQTDMISKDHDQLSTDFENHVANQLSGLFTKLDMTLSKINGFNNDMVNKKDNIYHELEKAKKDYDEACSTMEMAR
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Template Conservation                           
  

             
 

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Template Sequence  YDALQAQTGASESLWADFAHKLGDQVLIPLNTYTGQFPEXKKKVEKRNRKLI. . . . . . . . . . . . . . . DYDGQRHSFQNLQ
Template Known Secondary structure  TTT...............
Template Predicted Secondary structure  ...............
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   92.......100.........110.........120.........130.........140... ......150......
 
   169170.........180.........190.........200.........210.........220.........230.........240........
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Query Sequence  NRYTKASNDRNKKKLDEKEMEMNKCKNEYLIKINQANRTKDKYYFQDVPEVLDLLQDVNEAKTLFLNDLWLKAASVENDL
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Template Conservation   
        
    
  
  

  

     
  

  
   
       
  
   
             
   
  
Template Sequence  ANANKRKDDVKLTKGREQLEEARRTYEILNTELHDELPALYDSRILFLVTNLQTLFATEQVFHNETAKIYSELEAIVDKL
Template Known Secondary structure  TTT
BTTB

TTTT
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   157..160.........170.........180.........190.........200.........210.........220.........230......
 
   249250...
Predicted Secondary structure 
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Query Sequence  GANVS
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Template Conservation       
Template Sequence  ATESQ
Template Known Secondary structure  TT
Template Predicted Secondary structure 
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   237..240.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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