Job Description P38822 Confidence 27.40% Date Mon Jul 2 19:20:36 BST 2012 Rank 297 Aligned Residues 204 % Identity 9% Template c3vkgB_ PDB info PDB header:motor protein Chain: B: PDB Molecule:dynein heavy chain, cytoplasmic; PDBTitle: crystal structure of an motor protein Resolution 2.81 Å

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		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.																.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	I	E	A	A	G	V	V	A	W	N	E	I	L	S	Q	T	D	M	I	S	K	D	H	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	T	D	F	E	N	H	V	A	N	Q	L	S	G	L	F	T	K	L	D	M	T	L	S	K	I	N	G	F	N	N	D	M	V	N	K	K	D
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Conservation																																																																							.
Template Sequence		S	H	R	D	A	V	V	S	S	L	V	Y	I	H	Q	T	I	G	E	A	N	I	R	L	L	K	R	Q	G	R	Q	N	Y	V	T	P	R	H	Y	L	D	F	I	N	Q	V	V	L	L	I	N	E	K	R	D	Q	L	E	E	E	Q	L	H	L	N	I	G	L	K	.	K	L	R	D	T	E	A	Q	V	K
Template Known Secondary structure																																																																							.
Template Predicted Secondary structure																																																																							.
Template SS confidence
		3222	.	.	.	.	.	.	.	3230	.	.	.	.	.	.	.	.	.	3240	.	.	.	.	.	.	.	.	.	3250	.	.	.	.	.	.	.	.	.	3260	.	.	.	.	.	.	.	.	.	3270	.	.	.	.	.	.	.	.	.	3280	.	.	.	.	.	.	.	.	.	3290		.	.	.	.	.	.	.	.	.	3300
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	Y	H	E	L	E	K	A	K	K	D	Y	D	E	A	C	S	T	M	E	M	A	R	N	R	Y	T	K	A	S	N	D	R	N	K	K	K	L	D	E	K	E	M	E	M	N	K	C	K	N	E	Y	L	I	K	I	N	Q	A	N	R	T	K	D	K	Y	Y	F	Q	D	V	P	E	V	L	D	L	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	Q	V	S	L	A	Q	K	N	R	E	L	D	V	K	N	E	Q	A	N	Q	K	L	K	Q	M	V	Q	D	Q	Q	A	A	E	I	K	Q	K	D	A	R	E	L	Q	V	Q	L	D	V	R	N	K	E	I	A	V	Q	E	Q	L	E	N	A	A	N	E	L	K	L	K	Q	D	E	I	V	A	T	I	T
Template Known Secondary structure																																																									T	T				T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		3301	.	.	.	.	.	.	.	.	3310	.	.	.	.	.	.	.	.	.	3320	.	.	.	.	.	.	.	.	.	3330	.	.	.	.	.	.	.	.	.	3340	.	.	.	.	.	.	.	.	.	3350	.	.	.	.	.	.	.	.	.	3360	.	.	.	.	.	.	.	.	.	3370	.	.	.	.	.	.	.	.	.	3380
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	N	E	A	K	T	L	F	L	N	D	L	W	L	K	A	A	S	V	E	N	D	L	G	A	N	V	S	K	R	L	Q	A	A	N	S	V	V	K	Q	N	K	P	S	L	N	T	A	I	F	I	K	H	N	L	K	N	W	K	E
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		A	L	E	.	K	S	I	A	T	Y	K	E	E	Y	A	T	L	I	R	E	T	E	Q	I	K	T	E	S	S	K	V	K	N	K	V	D	R	S	I	A	L	L	D	N	L	N	S	E	R	G	R	W	E	Q	Q	S	E	N	F	N	T
Template Known Secondary structure					.																																																		T	T	T	T
Template Predicted Secondary structure					.
Template SS confidence
		3524	.	.		.	.	.	3530	.	.	.	.	.	.	.	.	.	3540	.	.	.	.	.	.	.	.	.	3550	.	.	.	.	.	.	.	.	.	3560	.	.	.	.	.	.	.	.	.	3570	.	.	.	.	.	.	.	.	.	3580	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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