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Job DescriptionP38822
Confidence99.95%DateMon Jul 2 19:20:36 BST 2012
Rank6Aligned Residues269
% Identity15%Templatec3m3wA_
PDB info PDB header:endocytosisChain: A: PDB Molecule:protein kinase c and casein kinase ii substrate protein 3; PDBTitle: crystal strcuture of mouse pacsin3 bar domain mutant
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  SIGNEIKDSFKETHKWVQNNLKWLKDIEQFYRERAKLEKDYSERLSRLSAEYFNKKSSTSVPISVGDTPTTTPGSIEAAG
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Template Sequence  SFWE. . AGNYRRTVQRVEDGHRLCGDLVSCFQERARIEKAYAQQLADWARKWRG. . . . . . . . . . . . . . . AVEKGPQYGTL
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   15... .20.........30.........40.........50.........60...... ...70.......
 
   86...90.........100.........110.........120...... ...130.........140.........150.........160..
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Query Sequence  VVAWNEILSQTDMISKDHDQLSTDFENHVANQLSGLFTKLD. . . MTLSKINGFNNDMVNKKDNIYHELEKAKKDYDEACS
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Template Sequence  EKAWHAFFTAAERLSELHLEVREKLHGPDSERVRTWQRGAFHGFRASRAAEDGFRKAQKPWLKRLKEVEASKKSYHTARK
Template Known Secondary structure  TT


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   78.80.........90.........100.........110.........120.........130.........140.........150.......
 
   163......170... ......180.........190.........200.........210.........220.........230......
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Query Sequence  TMEMARNRYTK. . . . . . ASNDRNKKKLDEKEMEMNKCKNEYLIKINQANRTKDKYYFQDVPEVLDLLQDVNEAKTLFLND
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Template Sequence  DEKTAQTRESHAKADSSMQLRKLQERVGRCTKEAEKMKTQYEQTLAELNRYTPRYM. EDMEQAFESCQAAERQRLLFFKD
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   163......170.........180.........190.........200.........210........ .220.........230.........240.
 
   237..240... ......250.........260.........270.........280.........290...
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Query Sequence  LWLKAAS. VENDLGANVSKRLQAANSVVKQNKPSLNTAIFIKHNLKNWKEPQDFVYKP
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Template Sequence  VLLTLHQHLDLSSSDKFHELHRDLQQSIEAASDEEDLRWWRSTHGPGMAMNWP. QFEE
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GGG


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   245....250.........260.........270.........280.........290....... ..300.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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