Return to main results Retrieve Phyre Job Id

Job DescriptionP38822
Confidence66.92%DateMon Jul 2 19:20:36 BST 2012
Rank263Aligned Residues35
% Identity20%Templatec3m1uB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:putative gamma-d-glutamyl-l-diamino acid endopeptidase; PDBTitle: crystal structure of a putative gamma-d-glutamyl-l-diamino acid2 endopeptidase (dvu_0896) from desulfovibrio vulgaris hildenborough at3 1.75 a resolution
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   598.600.........610.........620.........630..
Predicted Secondary structure 















Query SS confidence 


































Query Sequence  IDPGDIITVIRGDDGSGWTYGECDGLKGLFPTSYC
Query Conservation 
  

 
 
      



 

  
  



 


Alig confidence 


































Template Conservation 
  



 
 
 
 

 
  


    


 
  
Template Sequence  VWXGTPVFVGHATADRAWLYVETAFAAGWXPAADV
Template Known Secondary structure 
TT

TTSS
SS
GGG
Template Predicted Secondary structure 
















Template SS confidence 


































   186...190.........200.........210.........220
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions