Job Description P38822 Confidence 99.93% Date Mon Jul 2 19:20:36 BST 2012 Rank 14 Aligned Residues 259 % Identity 16% Template c3acoB_ PDB info PDB header:endocytosis Chain: B: PDB Molecule:protein kinase c and casein kinase substrate in PDBTitle: crystal structure of the efc/f-bar domain of human2 pacsin2/syndapin ii (2.7 a) Resolution 2.70 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	G	N	E	I	K	D	S	F	K	E	T	H	K	W	V	Q	N	N	L	K	W	L	K	D	I	E	Q	F	Y	R	E	R	A	K	L	E	K	D	Y	S	E	R	L	S	R	L	S	A	E	Y	F	N	K	K	S	S	T	S	V	P	I	S	V	G	D	T	P	T	T	T	P	G	S	I	E	A	A	G
Query Conservation
Alig confidence							.	.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	F	W	E	V	.	.	G	N	Y	K	R	T	V	K	R	I	D	D	G	H	R	L	C	S	D	L	X	N	C	L	H	E	R	A	R	I	E	K	A	Y	A	Q	Q	L	T	E	W	A	R	R	W	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	E	K	G	P	Q	Y	G	T	V
Template Known Secondary structure			T	T	S	T	.	.	T	T	T																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S
Template Predicted Secondary structure							.	.																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.																.	70	.	.	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.									.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.
Query Sequence		V	V	A	W	N	E	I	L	S	Q	T	D	M	I	S	K	D	H	D	Q	L	S	T	D	F	E	N	H	V	A	N	Q	L	S	G	L	F	T	K	L	D	.	.	.	.	.	.	.	.	M	T	L	S	K	I	N	G	F	N	N	D	M	V	N	K	K	D	N	I	Y	H	E	L	E	K	A	K	K	D	Y
Query Conservation																																											.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	K	A	W	X	A	F	X	S	E	A	E	R	V	S	E	L	H	L	E	V	K	A	S	L	X	N	D	D	F	E	K	I	K	N	W	Q	K	E	A	F	H	K	Q	X	X	G	G	F	K	E	T	K	E	A	E	D	G	F	R	K	A	Q	K	P	W	A	K	K	L	K	E	V	E	A	A	K	K	A	H
Template Known Secondary structure																													T															B		S	S	S	S	B
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.										.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.
Query Sequence		D	E	A	C	S	T	M	E	M	A	R	N	R	Y	T	K	A	S	N	.	.	.	.	.	.	.	.	.	D	R	N	K	K	K	L	D	E	K	E	M	E	M	N	K	C	K	N	E	Y	L	I	K	I	N	Q	A	N	R	T	K	D	K	Y	Y	F	Q	D	V	P	E	V	L	D	L	L	Q	D	V	N	E
Query Conservation																					.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.																																		.
Template Conservation																																																															.
Template Sequence		H	A	A	C	K	E	E	K	L	A	I	S	R	E	A	N	S	K	A	D	P	S	L	N	P	E	Q	L	K	K	L	Q	D	K	I	E	K	C	K	Q	D	V	L	K	T	K	E	K	Y	E	K	S	L	K	E	L	D	Q	G	T	P	.	Q	Y	X	E	N	X	E	Q	V	F	E	Q	C	Q	Q	F	E	E
Template Known Secondary structure			T	T	T	T	T					T	T					S	S	S		S	S			T	T	T	T	T	T	T	T	G	G	G	T	T	T																	T	T	T	T	T			.
Template Predicted Secondary structure																																																															.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		A	K	T	L	F	L	N	D	L	W	L	K	A	A	S	V	E	.	N	D	L	G	A	N	V	S	K	R	L	Q	A	A	N	S	V	V	K	Q	N	K	P	S	L	N	T	A	I	F	I	K	H	N	L	K	N
Query Conservation																			.
Alig confidence																			.
Template Conservation
Template Sequence		K	R	L	R	F	F	R	E	V	L	L	E	V	Q	K	H	L	D	L	S	N	V	A	G	Y	K	A	I	Y	H	D	L	E	Q	S	I	R	A	A	D	A	V	E	D	L	R	W	F	R	A	N	H	G	P	G
Template Known Secondary structure																					T	T																																S	T	T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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