Job Description P38822 Confidence 99.95% Date Mon Jul 2 19:20:36 BST 2012 Rank 7 Aligned Residues 263 % Identity 14% Template c2v0oB_ PDB info PDB header:lipid-binding protein Chain: B: PDB Molecule:fch domain only protein 2; PDBTitle: fcho2 f-bar domain Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	G	N	E	I	K	D	S	F	K	E	T	H	K	W	V	Q	N	N	L	K	W	L	K	D	I	E	Q	F	Y	R	E	R	A	K	L	E	K	D	Y	S	E	R	L	S	R	L	S	A	E	Y	F	N	K	K	S	S	T	S	V	P	I	S	V	G	D	T	P	T	T	T	P	G	S	I	E	A	A	G
Query Conservation
Alig confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	F	W	G	E	K	N	S	G	F	D	V	L	Y	H	N	M	K	H	G	Q	I	S	T	K	E	L	A	D	F	V	R	E	R	A	T	I	E	E	A	Y	S	R	S	M	T	K	L	A	K	S	A	S	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	Q	L	G	T	F
Template Known Secondary structure		S				S	S													T																																	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		S		S	T	T
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.																				.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																												.	.
Query SS confidence																																												.	.
Query Sequence		V	V	A	W	N	E	I	L	S	Q	T	D	M	I	S	K	D	H	D	Q	L	S	T	D	F	E	N	H	V	A	N	Q	L	S	G	L	F	T	K	L	D	M	.	.	T	L	S	K	I	N	G	F	N	N	D	M	V	N	K	K	D	N	I	Y	H	E	L	E	K	A	K	K	D	Y	D	E	A	C	S	T
Query Conservation																																												.	.
Alig confidence																																												.	.
Template Conservation
Template Sequence		A	P	V	W	D	V	F	K	T	S	T	E	K	L	A	N	C	H	L	D	L	V	R	K	L	Q	E	L	I	K	E	V	Q	K	Y	G	E	E	Q	V	K	S	H	K	K	T	K	E	E	V	A	G	T	L	E	A	V	Q	T	I	Q	S	I	T	Q	A	L	Q	K	S	K	E	N	Y	N	A	K	C	V	E
Template Known Secondary structure		G	G	G																																															T	S
Template Predicted Secondary structure
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	M	A	R	N	R	Y	T	K	A	S	N	D	R	N	K	K	K	L	D	E	K	E	M	E	M	N	K	C	K	N	E	Y	L	I	K	I	N	Q	A	N	R	T	K	D	K	Y	Y	F	Q	D	V	P	E	V	L	D	L	L	Q	D	V	N	E	A	K	T	L	F	L	N	D	L	W	L	K	A	A	S
Query Conservation
Alig confidence									.	.	.	.	.	.																																			.
Template Conservation									.	.	.	.	.	.																																			.
Template Sequence		Q	E	R	L	K	K	E	.	.	.	.	.	.	G	A	T	Q	R	E	I	E	K	A	A	V	K	S	K	K	A	T	D	T	Y	K	L	Y	V	E	K	Y	A	L	A	K	A	D	.	F	E	Q	K	M	T	E	T	A	Q	K	F	Q	D	I	E	E	T	H	L	I	H	I	K	E	I	I	G	S	L	S	N
Template Known Secondary structure									.	.	.	.	.	.																																			.
Template Predicted Secondary structure									.	.	.	.	.	.																																			.
Template SS confidence
		150	.	.	.	.	.	.							.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	N	D	L	G	A	N	V	S	K	R	L	Q	A	A	N	S	V	V	K	Q	N	K	P	S	L	N	T	A	I	F	I	K	H	N	L	K	N	W	K	E	P	Q	D	F	V	Y	K	P	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	K	E	I	H	L	Q	I	G	Q	V	H	E	E	F	I	N	N	M	A	N	T	T	V	E	S	L	I	Q	K	F	A	E	S	K	G	T	G	K	E	R	P	G	L	I	E	F	E	E	C
Template Known Secondary structure																								S																	S	S
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions