Phyre 2 alignment of P38822 with c2ed1A

Job Description P38822
Confidence 99.66% Date Mon Jul 2 19:20:36 BST 2012

Rank 101 Aligned Residues 62

% Identity 32% Template c2ed1A_

PDB info PDB header:signaling protein Chain: A: PDB Molecule:130 kda phosphatidylinositol 4,5-biphosphate- PDBTitle: solution structure of the sh3 domain of 130 kda2 phosphatidylinositol 4,5-biphosphate-dependent arf1 gtpase-3 activating protein

Resolution UNK

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	571	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.				.	.	.	.	.	.	.	.	630	.	.	.
Predicted Secondary structure																																																				.	.	.
Query SS confidence																																																				.	.	.
Query Sequence	P	P	R	R	S	T	L	P	V	R	T	M	E	A	I	Y	A	Y	E	A	Q	G	D	D	E	I	S	I	D	P	G	D	I	I	T	V	I	R	G	D	D	G	S	G	W	T	Y	G	E	C	D	.	.	.	G	L	K	G	L	F	P	T	S	Y	C	K
Query Conservation																																																				.	.	.
Alig confidence																																										.										.	.	.
Template Conservation																																										.
Template Sequence	S	S	G	S	S	G	N	K	V	R	R	V	K	T	I	Y	D	C	Q	A	D	N	D	D	E	L	T	F	I	E	G	E	V	I	I	V	T	G	E	E	D	.	Q	E	W	W	I	G	H	I	E	G	Q	P	E	R	K	G	V	F	P	V	S	F	V	H
Template Known Secondary structure		S			S	S									S	S					S	S	S	S	B					S	S						S	S			S	.	S	S							T	T		T	T							G	G	G
Template Predicted Secondary structure																																										.
Template SS confidence
	2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.

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Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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