Return to main results Retrieve Phyre Job Id

Job DescriptionP38822
Confidence99.61%DateMon Jul 2 19:20:36 BST 2012
Rank155Aligned Residues60
% Identity30%Templatec2dm1A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:protein vav-2; PDBTitle: solution structure of the second sh3 domain of human2 protein vav-2
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   574.....580.........590.........600.........610. ........620.........630...
Predicted Secondary structure 























.










Query SS confidence 





































.





















Query Sequence  RSTLPVRTMEAIYAYEAQGDDEISIDPGDIITVIRGDD. GSGWTYGECDGLKGLFPTSYCK
Query Conservation            


 
 
    



  

 
 
     . 



 

  
  



 


 
Alig confidence 





































.





















Template Conservation            

 

      


   

 
 
         
      
  
 

  

 
Template Sequence  SSGSSGGTAVARYNFAARDMRELSLREGDVVRIYSRIGGDQGWWKGETNGRIGWFPSTYVE
Template Known Secondary structure 



SSSSS
B


STTB

B
TT


BSSSSSSS
TT
SSS
Template Predicted Secondary structure 



























Template SS confidence 




























































   2.......10.........20.........30.........40.........50.........60..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions