Job Description P38822 Confidence 57.81% Date Mon Jul 2 19:20:36 BST 2012 Rank 268 Aligned Residues 213 % Identity 9% Template c2d1lA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:metastasis suppressor protein 1; PDBTitle: structure of f-actin binding domain imd of mim (missing in metastasis) Resolution 1.85 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	G	N	E	I	K	D	S	F	K	E	T	H	K	W	V	Q	N	N	L	K	W	L	K	D	I	E	Q	F	Y	R	E	R	A	K	L	E	K	D	Y	S	E	R	L	S	R	L	S	A	E	Y	F	N	K	K	S	S	T	S	V	P	I	S	V	G	D	T	P	T	T	T	P	G	S	I	E	A	A	G
Query Conservation
Alig confidence																		.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	I	I	S	D	X	K	G	S	Y	P	V	W	E	D	F	.	.	.	.	I	N	K	A	G	K	L	Q	S	Q	L	R	T	T	V	V	A	A	A	A	F	L	D	A	F	Q	K	V	A	D	X	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	N	T	R	G	G	T	R	E	I
Template Known Secondary structure									T									.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	S	S	T
Template Predicted Secondary structure																		.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.					.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.																			.	.	.	.	.	70	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	A	W	N	E	I	L	S	Q	T	D	M	I	S	K	D	H	D	Q	L	S	T	D	F	E	N	H	V	A	N	Q	L	S	G	L	F	T	K	L	D	M	T	L	S	K	I	N	G	F	N	N	D	M	V	N	K	K	D	N	I	Y	H	E	L	E	K	A	K	K	D	Y	D	E	A	C	S	T	M	E
Query Conservation
Alig confidence																																																							.	.	.
Template Conservation																																																							.	.	.
Template Sequence		G	S	A	L	T	R	X	C	X	R	H	R	S	I	E	A	K	L	R	Q	F	S	S	A	L	I	D	C	L	I	N	P	L	Q	E	Q	X	E	E	W	K	K	V	A	N	Q	L	D	K	D	H	A	K	.	.	.	E	Y	K	K	A	R	Q	E	I	K	K	K	S	S	D	T	L	K	L	Q	K	K	A	K
Template Known Secondary structure																														T																									.	.	.																							S	S
Template Predicted Secondary structure																																																							.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.				.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.				180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		M	A	R	N	R	Y	T	K	A	S	N	D	R	N	.	.	.	K	K	K	L	D	E	K	E	M	E	M	N	K	C	K	N	E	Y	L	I	K	I	N	Q	A	N	R	T	K	D	K	Y	Y	F	Q	D	V	P	E	V	L	D	L	L	Q	D	V	N	E	A	K	T	L	F	L	N	D	L	W	L	K	A	A
Query Conservation																.	.	.
Alig confidence																.	.	.																																																			.
Template Conservation																																																																					.
Template Sequence		K	V	D	A	Q	G	R	G	D	I	Q	P	Q	L	D	S	A	L	Q	D	V	N	D	K	Y	L	L	L	E	E	T	E	K	Q	A	V	R	K	A	L	I	E	E	R	G	R	F	C	T	F	I	S	X	L	R	P	V	I	E	E	E	I	S	X	L	G	E	.	I	T	H	L	Q	T	I	S	E	D	L	K
Template Known Secondary structure			G	G	G	T	T	T	T	S																																																						G	G	G	G	G	.
Template Predicted Secondary structure																																																																					.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.
		243	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		232	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions