Return to main results Retrieve Phyre Job Id

Job DescriptionP38822
Confidence99.62%DateMon Jul 2 19:20:36 BST 2012
Rank142Aligned Residues55
% Identity25%Templatec1z9qA_
PDB info PDB header:oxidoreductase activatorChain: A: PDB Molecule:neutrophil cytosol factor 4; PDBTitle: solution structure of sh3 domain of p40phox
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   578.580.........590.........600.........610.........620.........630...
Predicted Secondary structure 






























Query SS confidence 























































Query Sequence  PVRTMEAIYAYEAQGDDEISIDPGDIITVIRGDDGSGWTYGECDGLKGLFPTSYCK
Query Conservation        


 
 
    



  

 
 
      



 

  
  



 


 
Alig confidence 

































.




















Template Conservation        

 

      


   

 
 
     .  
  
   
  
 

  

 
Template Sequence  AAPRAEALFDFTGNSKLELNFKAGDVIFLLSRIN. KDWLEGTVRGATGIFPLSFVK
Template Known Secondary structure  S


SS



SSTTB



TT

B


SS.SSTTGGG
Template Predicted Secondary structure 

















.





Template SS confidence 























































   4.....10.........20.........30....... ..40.........50........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions