Job Description P38822 Confidence 99.88% Date Mon Jul 2 19:20:36 BST 2012 Rank 17 Aligned Residues 191 % Identity 16% Template c1mv3A_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc Resolution UNK

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		443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	G	P	L	H	I	T	S	L	F	N	T	S	R	R	T	R	L	G	S	A	P	N	N	A	G	E	D	S	D	N	N	S	I	R	T	T	S	T	N	N	T	K	K	T	T	Q	N	S	S	D	D	G	K	N	K	V	L	Y	A	Y	V	Q	K	D	D	D	E	I	T	I	T	P	G	D	K	I	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	S	P	A	A	T	P	E	I	R	V	N	H	E	P	E	P	A	G	G	A	T	P	G	A	T	L	P	K	S	P	S	Q	L	R	K	G	P	P	V	P	P	P	P	K	H	T	P	S	K	E	V	K	Q	E	Q	I	L	S	L	F	E	D	T	F	V	P	E	I	S	V	T	T	P	S	Q	P	A	E
Template Known Secondary structure																																				S										S
Template Predicted Secondary structure
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		523	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580						.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.
Query Sequence		V	A	R	D	T	G	S	G	W	T	K	I	N	N	D	T	T	G	E	T	G	L	V	P	T	T	Y	I	R	I	S	S	A	A	T	V	K	A	N	D	R	G	P	A	P	E	V	P	P	P	R	R	S	T	L	P	V	R	.	.	.	.	.	T	M	E	A	I	Y	A	Y	E	A	Q	G	D	D	E	I	S
Query Conservation																																																												.	.	.	.	.
Alig confidence																																																												.	.	.	.	.
Template Conservation
Template Sequence		A	S	E	V	A	G	G	T	Q	P	A	A	G	A	Q	E	P	G	E	T	A	A	S	E	A	A	S	S	S	L	P	A	V	V	V	E	T	F	P	A	T	V	N	G	T	V	E	G	G	S	G	A	G	R	L	D	L	P	P	G	F	M	F	K	V	Q	A	Q	H	D	Y	T	A	T	D	T	D	E	L	Q
Template Known Secondary structure								S	S																																															S	S			T	T								S	S		B				S	T	T
Template Predicted Secondary structure
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
		598	.	600	.	.	.	.	.	.	.	.	.	610	.					.	.	.	.	.	.	.											.	620	.	.	.	.	.	.	.	.	.	630	.	.	.
Predicted Secondary structure																.	.	.	.								.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.								.	.	.	.	.	.	.	.	.	.
Query Sequence		I	D	P	G	D	I	I	T	V	I	R	G	D	D	.	.	.	.	G	S	G	W	T	Y	G	.	.	.	.	.	.	.	.	.	.	E	C	D	G	L	K	G	L	F	P	T	S	Y	C	K
Query Conservation																.	.	.	.								.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.								.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	A	G	D	V	V	L	V	I	P	F	Q	N	P	E	E	Q	D	E	G	W	L	M	G	V	K	E	S	D	W	N	Q	H	K	K	L	E	K	C	R	G	V	F	P	E	N	F	T	E
Template Known Secondary structure		B		S	S									S		G	G	G	S		T	T												T	G	G	G	G	G	G	T						S	T	T
Template Predicted Secondary structure
Template SS confidence
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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