Email l.a.kelley@imperial.ac.uk Description P00044 Date Mon Jul 2 19:10:25 BST 2012 Unique Job ID a8df9986e5a5c6d0

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1ycca_ 100.0 100 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 2 d1yeba_ 100.0 91 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 3 d1wejf_ 99.9 62 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 4 d1ytca_ 99.9 82 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 5 d1j3sa_ 99.9 63 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 6 d1lfma_ 99.9 62 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 7 d1ccra_ 99.9 57 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 8 c3m97X_ 99.9 36 PDB header:electron transport Chain: X: PDB Molecule:cytochrome c-552; PDBTitle: structure of the soluble domain of cytochrome c552 with its flexible2 linker segment from paracoccus denitrificans 9 d1ql3a_ 99.9 37 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 10 d1hroa_ 99.9 43 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 11 d1co6a_ 99.9 47 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 12 c2w9kA_ 99.9 49 PDB header:electron transport Chain: A: PDB Molecule:cytochrome c; PDBTitle: crithidia fasciculata cytochrome c 13 d1lmsa_ 99.9 97 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 14 d1qn2a_ 99.9 42 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 15 d1jdla_ 99.8 32 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 16 d3c2ca_ 99.8 37 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 17 d1i8oa_ 99.8 39 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 18 d1vyda_ 99.8 28 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 19 d1cxca_ 99.8 36 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 20 d155ca_ 99.8 32 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 21 c2yevB_ not modelled 99.8 27 PDB header:electron transport Chain: B: PDB Molecule:cytochrome c oxidase subunit 2; PDBTitle: structure of caa3-type cytochrome oxidase 22 d1cota_ not modelled 99.8 31 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 23 d1h32b_ not modelled 99.6 33 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 24 d1kb0a1 not modelled 99.6 20 Fold:Cytochrome c Superfamily:Cytochrome c Family:Quinoprotein alcohol dehydrogenase, C-terminal domain 25 c1w2lA_ not modelled 99.6 28 PDB header:oxidoreductase Chain: A: PDB Molecule:cytochrome oxidase subunit ii; PDBTitle: cytochrome c domain of caa3 oxygen oxidoreductase 26 c3oa8B_ not modelled 99.6 25 PDB header:heme-binding protein/heme-binding protei Chain: B: PDB Molecule:soxx; PDBTitle: diheme soxax 27 c3cp5A_ not modelled 99.6 29 PDB header:electron transport Chain: A: PDB Molecule:cytochrome c; PDBTitle: cytochrome c from rhodothermus marinus 28 c2c1dB_ not modelled 99.6 24 PDB header:oxidoreductase Chain: B: PDB Molecule:soxx; PDBTitle: crystal structure of soxxa from p. pantotrophus 29 c2d0wA_ not modelled 99.6 21 PDB header:electron transport Chain: A: PDB Molecule:cytochrome cl; PDBTitle: crystal structure of cytochrome cl from hyphomicrobium2 denitrificans 30 c3dr0B_ not modelled 99.6 18 PDB header:electron transport Chain: B: PDB Molecule:cytochrome c6; PDBTitle: structure of reduced cytochrome c6 from synechococcus sp. pcc 7002 31 c3o0rC_ not modelled 99.6 18 PDB header:immune system/oxidoreductase Chain: C: PDB Molecule:nitric oxide reductase subunit c; PDBTitle: crystal structure of nitric oxide reductase from pseudomonas2 aeruginosa in complex with antibody fragment 32 c1w5cT_ not modelled 99.5 15 PDB header:photosynthesis Chain: T: PDB Molecule:cytochrome c-550; PDBTitle: photosystem ii from thermosynechococcus elongatus 33 d2gc4d1 not modelled 99.5 14 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 34 c3mk7B_ not modelled 99.5 31 PDB header:oxidoreductase Chain: B: PDB Molecule:cytochrome c oxidase, cbb3-type, subunit o; PDBTitle: the structure of cbb3 cytochrome oxidase 35 d1f1ca_ not modelled 99.5 17 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 36 d2c8sa1 not modelled 99.5 18 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 37 c3dmiA_ not modelled 99.5 19 PDB header:electron transport Chain: A: PDB Molecule:cytochrome c6; PDBTitle: crystallization and structural analysis of cytochrome c62 from the diatom phaeodactylum tricornutum at 1.5 a3 resolution 38 d1e29a_ not modelled 99.5 22 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 39 c2xtsD_ not modelled 99.5 20 PDB header:oxidoreductase/electron transport Chain: D: PDB Molecule:cytochrome; PDBTitle: crystal structure of the sulfane dehydrogenase soxcd from paracoccus2 pantotrophus 40 d1m70a1 not modelled 99.5 25 Fold:Cytochrome c Superfamily:Cytochrome c Family:Two-domain cytochrome c 41 d1c52a_ not modelled 99.5 21 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 42 d1mz4a_ not modelled 99.5 16 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 43 d1fi3a_ not modelled 99.5 22 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 44 d1cnoa_ not modelled 99.5 17 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 45 d1c6ra_ not modelled 99.5 14 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 46 c3mk7F_ not modelled 99.5 17 PDB header:oxidoreductase Chain: F: PDB Molecule:cytochrome c oxidase, cbb3-type, subunit p; PDBTitle: the structure of cbb3 cytochrome oxidase 47 c2zzsW_ not modelled 99.5 21 PDB header:electron transport Chain: W: PDB Molecule: PDBTitle: crystal structure of cytochrome c554 from vibrio2 parahaemolyticus strain rimd2210633 48 d1c6sa_ not modelled 99.5 17 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 49 c2l4dA_ not modelled 99.5 33 PDB header:electron transport Chain: A: PDB Molecule:sco1/senc family protein/cytochrome c; PDBTitle: cytochrome c domain of pp3183 protein from pseudomonas putida 50 d1ctja_ not modelled 99.5 15 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 51 d351ca_ not modelled 99.4 21 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 52 d1h9xa1 not modelled 99.4 17 Fold:Cytochrome c Superfamily:Cytochrome c Family:N-terminal (heme c) domain of cytochrome cd1-nitrite reductase 53 c2v07A_ not modelled 99.4 25 PDB header:photosynthesis Chain: A: PDB Molecule:cytochrome c6; PDBTitle: structure of the arabidopsis thaliana cytochrome c6a v52q2 variant 54 d1f1fa_ not modelled 99.4 15 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 55 d1gdva_ not modelled 99.4 21 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 56 d1hzua1 not modelled 99.4 14 Fold:Cytochrome c Superfamily:Cytochrome c Family:N-terminal (heme c) domain of cytochrome cd1-nitrite reductase 57 d1dvva_ not modelled 99.4 20 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 58 d1nira1 not modelled 99.4 16 Fold:Cytochrome c Superfamily:Cytochrome c Family:N-terminal (heme c) domain of cytochrome cd1-nitrite reductase 59 d1cyja_ not modelled 99.4 15 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 60 d1kv9a1 not modelled 99.4 14 Fold:Cytochrome c Superfamily:Cytochrome c Family:Quinoprotein alcohol dehydrogenase, C-terminal domain 61 d1cora_ not modelled 99.4 22 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 62 d1ls9a_ not modelled 99.4 15 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 63 d1h1oa2 not modelled 99.4 28 Fold:Cytochrome c Superfamily:Cytochrome c Family:Two-domain cytochrome c 64 c2zooA_ not modelled 99.4 16 PDB header:oxidoreductase Chain: A: PDB Molecule:probable nitrite reductase; PDBTitle: crystal structure of nitrite reductase from pseudoalteromonas2 haloplanktis tac125 65 c1m70D_ not modelled 99.4 21 PDB header:electron transport Chain: D: PDB Molecule:cytochrome c4; PDBTitle: crystal structure of oxidized recombinant cytochrome c4 from2 pseudomonas stutzeri 66 d1ynra1 not modelled 99.4 17 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 67 d1c75a_ not modelled 99.3 19 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 68 d1e2rb1 not modelled 99.3 21 Fold:Cytochrome c Superfamily:Cytochrome c Family:N-terminal (heme c) domain of cytochrome cd1-nitrite reductase 69 c2zxyA_ not modelled 99.3 25 PDB header:oxygen binding, transport protein Chain: A: PDB Molecule:cytochrome c552; PDBTitle: crystal structure of cytochrome c555 from aquifex aeolicus 70 d1a56a_ not modelled 99.3 22 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 71 d1cc5a_ not modelled 99.3 15 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 72 d1dy7b1 not modelled 99.3 16 Fold:Cytochrome c Superfamily:Cytochrome c Family:N-terminal (heme c) domain of cytochrome cd1-nitrite reductase 73 d1kx7a_ not modelled 99.3 15 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 74 d1wvec1 not modelled 99.3 28 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 75 c2d0sA_ not modelled 99.3 22 PDB header:electron transport Chain: A: PDB Molecule:cytochrome c; PDBTitle: crystal structure of the cytochrome c552 from moderate2 thermophilic bacterium, hydrogenophilus thermoluteolus 76 d1hj3a1 not modelled 99.3 18 Fold:Cytochrome c Superfamily:Cytochrome c Family:N-terminal (heme c) domain of cytochrome cd1-nitrite reductase 77 d1qksa1 not modelled 99.3 19 Fold:Cytochrome c Superfamily:Cytochrome c Family:N-terminal (heme c) domain of cytochrome cd1-nitrite reductase 78 d1fcdc2 not modelled 99.3 17 Fold:Cytochrome c Superfamily:Cytochrome c Family:Two-domain cytochrome c 79 d1m70a2 not modelled 99.3 19 Fold:Cytochrome c Superfamily:Cytochrome c Family:Two-domain cytochrome c 80 c2zonG_ not modelled 99.2 23 PDB header:oxidoreductase/electron transport Chain: G: PDB Molecule:cytochrome c551; PDBTitle: crystal structure of electron transfer complex of nitrite2 reductase with cytochrome c 81 d1c53a_ not modelled 99.2 13 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 82 d1dvha_ not modelled 99.2 18 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 83 c3cu4A_ not modelled 99.2 22 PDB header:electron transport Chain: A: PDB Molecule:cytochrome c family protein; PDBTitle: omcf, outer membrance cytochrome f from geobacter2 sulfurreducens 84 d1gksa_ not modelled 99.1 21 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 85 c1fcdD_ not modelled 99.1 17 PDB header:electron transport(flavocytochrome) Chain: D: PDB Molecule:flavocytochrome c sulfide dehydrogenase PDBTitle: the structure of flavocytochrome c sulfide dehydrogenase2 from a purple phototrophic bacterium chromatium vinosum at3 2.5 angstroms resolution 86 d1fcdc1 not modelled 99.1 18 Fold:Cytochrome c Superfamily:Cytochrome c Family:Two-domain cytochrome c 87 d1nmla2 not modelled 98.9 16 Fold:Cytochrome c Superfamily:Cytochrome c Family:Di-heme cytochrome c peroxidase 88 c3o5cA_ not modelled 98.9 19 PDB header:oxidoreductase Chain: A: PDB Molecule:cytochrome c551 peroxidase; PDBTitle: cytochrome c peroxidase bccp of shewanella oneidensis 89 c1kb0A_ not modelled 98.9 22 PDB header:oxidoreductase Chain: A: PDB Molecule:quinohemoprotein alcohol dehydrogenase; PDBTitle: crystal structure of quinohemoprotein alcohol dehydrogenase from2 comamonas testosteroni 90 d1h1oa1 not modelled 98.8 22 Fold:Cytochrome c Superfamily:Cytochrome c Family:Two-domain cytochrome c 91 c1zzhA_ not modelled 98.8 21 PDB header:oxidoreductase Chain: A: PDB Molecule:cytochrome c peroxidase; PDBTitle: structure of the fully oxidized di-heme cytochrome c2 peroxidase from r. capsulatus 92 c1iqcB_ not modelled 98.8 15 PDB header:oxidoreductase Chain: B: PDB Molecule:di-heme peroxidase; PDBTitle: crystal structure of di-heme peroxidase from nitrosomonas europaea 93 c1nnoA_ not modelled 98.8 18 PDB header:oxidoreductase Chain: A: PDB Molecule:nitrite reductase; PDBTitle: conformational changes occurring upon no binding in nitrite2 reductase from pseudomonas aeruginosa 94 d1eb7a2 not modelled 98.8 15 Fold:Cytochrome c Superfamily:Cytochrome c Family:Di-heme cytochrome c peroxidase 95 c2vhdB_ not modelled 98.8 16 PDB header:oxidoreductase Chain: B: PDB Molecule:cytochrome c551 peroxidase; PDBTitle: crystal structure of the di-haem cytochrome c peroxidase2 from pseudomonas aeruginosa - mixed valence form 96 d1iqca2 not modelled 98.8 15 Fold:Cytochrome c Superfamily:Cytochrome c Family:Di-heme cytochrome c peroxidase 97 c1nmlA_ not modelled 98.8 16 PDB header:oxidoreductase Chain: A: PDB Molecule:di-haem cytochrome c peroxidase; PDBTitle: di-haemic cytochrome c peroxidase from pseudomonas nautica 617, form2 in (ph 4.0) 98 c3hq7A_ not modelled 98.8 16 PDB header:oxidoreductase Chain: A: PDB Molecule:cytochrome c551 peroxidase; PDBTitle: ccpa from g. sulfurreducens, g94k/k97q/r100i variant 99 c2c1uB_ not modelled 98.8 16 PDB header:oxidoreductase Chain: B: PDB Molecule:di-haem cytochrome c peroxidase; PDBTitle: crystal structure of the di-haem cytochrome c peroxidase2 from paracoccus pantotrophus - oxidised form 100 c3l4oB_ not modelled 98.7 21 PDB header:oxidoreductase/electron transport Chain: B: PDB Molecule:methylamine utilization protein maug; PDBTitle: crystal structure of the maug/pre-methylamine dehydrogenase complex2 after treatment with hydrogen peroxide 101 c1gq1B_ not modelled 98.6 20 PDB header:oxidoreductase Chain: B: PDB Molecule:cytochrome cd1 nitrite reductase; PDBTitle: cytochrome cd1 nitrite reductase, y25s mutant, oxidised2 form 102 c3oa8A_ not modelled 98.6 17 PDB header:heme-binding protein/heme-binding protei Chain: A: PDB Molecule:soxa; PDBTitle: diheme soxax 103 c1kv9A_ not modelled 98.5 14 PDB header:oxidoreductase Chain: A: PDB Molecule:type ii quinohemoprotein alcohol dehydrogenase; PDBTitle: structure at 1.9 a resolution of a quinohemoprotein alcohol2 dehydrogenase from pseudomonas putida hk5 104 c1h1oA_ not modelled 98.4 19 PDB header:electron transport Chain: A: PDB Molecule:cytochrome c-552; PDBTitle: acidithiobacillus ferrooxidans cytochrome c4 structure2 supports a complex-induced tuning of electron transfer 105 c2yiuE_ not modelled 98.4 17 PDB header:oxidoreductase Chain: E: PDB Molecule:cytochrome c1, heme protein; PDBTitle: x-ray structure of the dimeric cytochrome bc1 complex from2 the soil bacterium paracoccus denitrificans at 2.73 angstrom resolution 106 c1p84D_ not modelled 98.3 28 PDB header:oxidoreductase Chain: D: PDB Molecule:cytochrome c1, heme protein; PDBTitle: hdbt inhibited yeast cytochrome bc1 complex 107 c3cwbQ_ not modelled 98.2 26 PDB header:oxidoreductase Chain: Q: PDB Molecule:mitochondrial cytochrome c1, heme protein; PDBTitle: chicken cytochrome bc1 complex inhibited by an iodinated analogue of2 the polyketide crocacin-d 108 c1h32A_ not modelled 98.0 16 PDB header:electron transfer Chain: A: PDB Molecule:diheme cytochrome c; PDBTitle: reduced soxax complex from rhodovulum sulfidophilum 109 c1zrtD_ not modelled 98.0 12 PDB header:oxidoreductase/metal transport Chain: D: PDB Molecule:cytochrome c1; PDBTitle: rhodobacter capsulatus cytochrome bc1 complex with2 stigmatellin bound 110 c2c1dC_ not modelled 97.9 18 PDB header:oxidoreductase Chain: C: PDB Molecule:soxa; PDBTitle: crystal structure of soxxa from p. pantotrophus 111 d3cx5d1 not modelled 97.8 25 Fold:Cytochrome c Superfamily:Cytochrome c Family:Cytochrome bc1 domain 112 d1h32a2 not modelled 97.8 14 Fold:Cytochrome c Superfamily:Cytochrome c Family:Di-heme cytochrome c SoxA 113 c1yiqA_ not modelled 97.6 24 PDB header:oxidoreductase Chain: A: PDB Molecule:quinohemoprotein alcohol dehydrogenase; PDBTitle: molecular cloning and structural analysis of2 quinohemoprotein alcohol dehydrogenase adhiig from3 pseudomonas putida hk5. compariison to the other4 quinohemoprotein alcohol dehydrogenase adhiib found in the5 same microorganism. 114 d1ppjd1 not modelled 97.6 22 Fold:Cytochrome c Superfamily:Cytochrome c Family:Cytochrome bc1 domain 115 d1dw0a_ not modelled 97.5 21 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 116 d1gu2a_ not modelled 97.3 21 Fold:Cytochrome c Superfamily:Cytochrome c Family:monodomain cytochrome c 117 d1pbya1 not modelled 97.1 21 Fold:Cytochrome c Superfamily:Cytochrome c Family:Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 118 c2fynH_ not modelled 97.1 21 PDB header:oxidoreductase Chain: H: PDB Molecule:cytochrome c1; PDBTitle: crystal structure analysis of the double mutant rhodobacter2 sphaeroides bc1 complex 119 c2bpbB_ not modelled 97.0 26 PDB header:oxidoreductase Chain: B: PDB Molecule:sulfite\:cytochrome c oxidoreductase subunit b; PDBTitle: sulfite dehydrogenase from starkeya novella 120 d1h32a1 not modelled 97.0 13 Fold:Cytochrome c Superfamily:Cytochrome c Family:Di-heme cytochrome c SoxA