Job Description P00044 Confidence 97.59% Date Mon Jul 2 19:10:25 BST 2012 Rank 114 Aligned Residues 106 % Identity 22% Template d1ppjd1 SCOP info Cytochrome c Cytochrome c Cytochrome bc1 domain Resolution 2.10

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.																																					.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	K	A	G	S	A	K	K	G	A	T	L	F	K	T	R	C	L	Q	C	H	T	V	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	P	H	K	V	G	P	N	L	H	G	I	F	G	R	H	S	G
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	H	T	S	I	R	R	G	F	Q	V	Y	K	Q	V	C	S	S	C	H	S	M	D	Y	V	A	Y	R	H	L	V	G	V	C	Y	T	E	D	E	A	K	A	L	A	E	E	V	E	V	Q	D	G	P	N	E	D	G	E	M	F	M	R	P	G	K	L	S	D	Y	F	P	K	P	Y	P	N	P	E	A
Template Known Secondary structure																	T	G	G	G	T				T	T		B					B	T	T	T	B										T	T	S								T	T	S									T	T	S	B				S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		48	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.																		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.													.	.	.
Predicted Secondary structure						.	.															.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.															.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	E	G	.	.	Y	S	Y	T	D	A	N	I	K	K	N	V	L	W	.	.	D	E	N	N	M	S	E	Y	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	K	K	Y	I	P	G	T	K	M	A	F	G	G	L	.	.	.	.	.	.	.	.	.	.	.	.	K	K	E
Query Conservation						.	.															.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.															.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	R	A	A	N	N	G	A	L	P	P	D	L	S	Y	I	V	R	A	R	H	G	G	E	D	Y	V	F	S	L	L	T	G	Y	C	E	P	P	T	G	V	S	L	R	E	G	L	Y	F	N	P	Y	F	P	G	Q	A	I	G	M	A	P	P	I	Y	N	E	V	L	E	F	D	D	G	T	P	A	T	M	S
Template Known Secondary structure					T	T	T	T							T	T	T	T	T	S	S	T	T										T							T	T					T	T					T	T	S	T	T	S			S	S						T	T	S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	R	N	D	L	I	T	Y	L	K	K	A	C	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	V	A	K	D	V	C	T	F	L	R	W	A	A	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions