Return to main results Retrieve Phyre Job Id

Job DescriptionP00044
Confidence99.89%DateMon Jul 2 19:10:25 BST 2012
Rank13Aligned Residues95
% Identity97%Templated1lmsa_
SCOP infoCytochrome c Cytochrome c monodomain cytochrome c
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50.........60.........70.........80.........90....
Predicted Secondary structure 

















































Query SS confidence 















































































Query Sequence  LFKTRCLQCHTVEKGGPHKVGPNLHGIFGRHSGQAEGYSYTDANIKKNVLWDENNMSEYLTNPKKYIPGTKMAFGGLKKE
Query Conservation 

   
  

     
    

 
                               
      
    


 

    
  
Alig confidence 















































































Template Conservation 

   
  

     
    

 
 
   
                         
   
  
        
     
  
Template Sequence  LFKTRCLQCHTVEKGGPHKVGPNLHGIFGRHSGQAEGYSYTDANIKKNVLWDENNMSEYLTNPAKYIPGTAMAFGGLKKE
Template Known Secondary structure 
S
SS

SSS


SSS






SSSS
SS



TTST
SSSTTT

TTS


TT
S


T
Template Predicted Secondary structure 























































Template SS confidence 















































































   910.........20.........30.........40.........50.........60.........70.........80........
 
   95....100.........
Predicted Secondary structure 

Query SS confidence 














Query Sequence  KDRNDLITYLKKACE
Query Conservation   

 





 
   
Alig confidence 














Template Conservation   
   




 

  
Template Sequence  KDRNDLITYLKKATE
Template Known Secondary structure  T
Template Predicted Secondary structure 

Template SS confidence 














   8990.........100...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions