Return to main results Retrieve Phyre Job Id

Job DescriptionP00044
Confidence99.93%DateMon Jul 2 19:10:25 BST 2012
Rank6Aligned Residues102
% Identity62%Templated1lfma_
SCOP infoCytochrome c Cytochrome c monodomain cytochrome c
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80......
Predicted Secondary structure 












































Query SS confidence 















































































Query Sequence  GSAKKGATLFKTRCLQCHTVEKGGPHKVGPNLHGIFGRHSGQAEGYSYTDANIKKNVLWDENNMSEYLTNPKKYIPGTKM
Query Conservation 

   
  

   
  

     
    

 
                               
      
    


 
Alig confidence 















































































Template Conservation 

  

  

   
  

     
    

 
                               
               
Template Sequence  GDVAKGKKTFVQKCAQCHTVENGGKHKVGPNLWGLFGRKTGQAEGYSYTDANKSKGIVWNNDTLMEYLENPKKYIPGTKM
Template Known Secondary structure 

TTTT


STT



SS


TT
TTSBTT

TT






B
S
STT
S
Template Predicted Secondary structure 
















































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   87..90.........100........
Predicted Secondary structure 







Query SS confidence 





















Query Sequence  AFGGLKKEKDRNDLITYLKKAC
Query Conservation 
    
   

 





 
  
Alig confidence 





















Template Conservation 
    

  

 





 

 
Template Sequence  IFAGIKKKGERQDLVAYLKSAT
Template Known Secondary structure 





S
Template Predicted Secondary structure 







Template SS confidence 





















   81........90.........100..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions