 |
| Job Description | P00044 | | Confidence | 99.44% | Date | Mon Jul 2 19:10:25 BST 2012 |
| Rank | 54 | Aligned Residues | 84 |
| % Identity | 15% | Template | d1f1fa_ |
| SCOP info | Cytochrome c
| Cytochrome c
| monodomain cytochrome c
|
| Resolution | 2.70 |
|
 |
|   |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
S | A | K | K | G | A | T | L | F | K | T | R | C | L | Q | C | H | T | V | E | K | G | G | P | H | K | V | G | P | N | L | H | G | I | F | G | R | H | S | G | Q | A | E | G | Y | S | Y | T | D | A | N | I | K | K | N | V | L | W | D | E | N | N | M | S | E | Y | L | T | N | P | K | K | Y | I | P | G | T | K | M | A |
| Query Conservation |   |
|   |   |   |
|   |   |
|
|   |   |   |
|   |   |
|
|   |   |   |   |   |
|   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|
|
|   |
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
| Template Conservation |   |
|   |   |   |
|   |   |
|
|   |   |   |
|
|   |
|
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |
|
|
| Template Sequence |   |
D | V | A | A | G | A | S | V | F | S | A | N | C | A | A | C | H | M | G | G | R | N | V | I | V | A | N | K | T | L | S | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | D | L | A | K | Y | L | K | G | F | D | D | D | A | V | A | A | V | A | Y | Q | V | T | N | G | K | N | . |
. |
A | M | P |
| Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  | G | G | G |
|
| S | S | S | T | T |
|
| S | S |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  | S | T | T | T | T | T |
|  |  |  |  |  |  |  |  |  |  |  |
| B | T | . | . | T | B |
|
| Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
| . | . |
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |
|
. | . | . |
|   |
|   |   |
88 | . | |
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| Query SS confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
F | G | . |
G | L | K | K | E | K | D | R | N | D | L | I | T | Y | L | K | K | A | C | E |
| Query Conservation |   |
  |   | . |   |   |
|   |   |   |
|
|   |
|
|
|
|
|
|   |
|   |   |   |
| Alig confidence |   |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |
|
|
|   |
|
|   |   |
|   |
|
|
|   |   |   |
|   |
| Template Sequence |   |
G | F | N | G | R | L | S | P | L | Q | I | E | D | V | A | A | Y | V | V | D | Q | A | E |
| Template Known Secondary structure |   |
|
| T | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
64 | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|