Return to main results Retrieve Phyre Job Id

Job DescriptionP00044
Confidence99.45%DateMon Jul 2 19:10:25 BST 2012
Rank50Aligned Residues84
% Identity15%Templated1ctja_
SCOP infoCytochrome c Cytochrome c monodomain cytochrome c
Resolution1.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
Predicted Secondary structure 












































Query SS confidence 















































































Query Sequence  AGSAKKGATLFKTRCLQCHTVEKGGPHKVGPNLHGIFGRHSGQAEGYSYTDANIKKNVLWDENNMSEYLTNPKKYIPGTK
Query Conservation   

   
  

   
  

     
    

 
                               
      
    


 
Alig confidence 


























...............


































...
Template Conservation 

 
  
  

   

 


  
 
  ...............                          
  
   

...
Template Sequence  EADLALGKAVFDGNCAACHAGGGNNVI. . . . . . . . . . . . . . . PDHTLQKAAIEQFLDGGFNIEAIVYQIENGKGAMP. . .
Template Known Secondary structure 


TGGG

SSS...............TTS
SSSTT
SS
BTTB
...
Template Predicted Secondary structure 











...............




















...
Template SS confidence 















































































   1........10.........20....... ..30.........40.........50.........60..
 
   86...90.........100........
Predicted Secondary structure 








Query SS confidence 






















Query Sequence  MAFGGLKKEKDRNDLITYLKKAC
Query Conservation 

    
   

 





 
  
Alig confidence  .





















Template Conservation  .     

  

  
 


 
  
Template Sequence  . AWDGRLDEDEIAGVAAYVYDQA
Template Known Secondary structure  .

BTTB
Template Predicted Secondary structure  .







Template SS confidence 






















   63......70.........80....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions