Job Description P00044 Confidence 99.54% Date Mon Jul 2 19:10:25 BST 2012 Rank 34 Aligned Residues 81 % Identity 31% Template c3mk7B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:cytochrome c oxidase, cbb3-type, subunit o; PDBTitle: the structure of cbb3 cytochrome oxidase Resolution 3.20 Å

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		7	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.																											30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	S	A	K	K	G	A	T	L	F	.	K	T	R	C	L	Q	C	H	T	V	E	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	H	K	V	G	P	N	L	H	G	I	F	G	R	H	S	G	Q	A	E	G	Y	S	Y	T	D	A	N	I
Query Conservation												.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	Q	L	E	G	R	D	L	Y	I	R	E	G	C	V	G	C	H	S	Q	M	I	R	P	F	R	A	E	T	E	R	Y	G	H	Y	S	V	A	G	E	S	V	Y	D	H	P	F	L	W	G	S	K	R	T	G	P	D	L	A	R	V	G	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure															T	G	G	G	T							S	S								S	S				G	G	G	G	T	T		S	S					S			S	S				T	T		T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.																																						.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	K	N	V	L	W	D	E	N	N	M	S	E	Y	L	T	N	P	K	K	Y	I	P	G	T	K	M	A	F	G	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	K	E	K	D	R	N	D	L	I	T
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	Y	S	D	D	W	H	R	A	H	L	Y	N	P	R	N	V	V	P	E	S	K	M	P	S	Y	P	W	L	V	E	N	T	L	D	G	K	D	T	A	K	K	M	S	A	L	R	M	L	G	V	P	Y	T	E	E	D	I	A	G	A	R	D	S	V	N	G	K	T	E	M	D	A	M	V	A
Template Known Secondary structure		.	.	.	.	.	S																S	T	T							T						B				T	T											T	T									T	T	S					T	T		B
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		103	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	K	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	L	Q	V	L
Template Known Secondary structure				T	T	T
Template Predicted Secondary structure
Template SS confidence
		191	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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