Job Description P00044 Confidence 99.57% Date Mon Jul 2 19:10:25 BST 2012 Rank 30 Aligned Residues 89 % Identity 18% Template c3dr0B_ PDB info PDB header:electron transport Chain: B: PDB Molecule:cytochrome c6; PDBTitle: structure of reduced cytochrome c6 from synechococcus sp. pcc 7002 Resolution 1.23 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	A	K	K	G	A	T	L	F	K	T	R	C	L	Q	C	H	T	V	E	K	G	G	P	H	K	V	G	P	N	L	H	G	I	F	G	R	H	S	G	Q	A	E	G	Y	S	Y	T	D	A	N	I	K	K	N	V	L	W	D	E	N	N	M	S	E	Y	L	T	N	P	K	K	Y	I	P	G	T	K	M
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	D	A	A	A	G	A	Q	V	F	A	A	N	C	A	A	C	H	A	G	G	N	N	A	V	M	P	T	K	T	L	K	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	K	T	Y	L	A	G	Y	K	D	G	S	K	S	L	E	E	A	V	A	Y	Q	V	T	N	G	Q	G	A	M	P
Template Known Secondary structure															T					G	G	G			S	S	S	T	T			S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T	T	T	T	S	S														B	T	T	B
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.															.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	G	G	L	K	K	E	K	D	R	N	D	L	I	T	Y	L	K	K	A	C	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	G	G	R	L	S	D	A	D	I	A	N	V	A	A	Y	I	A	D	Q	A	E
Template Known Secondary structure				T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions