Job Description P00044 Confidence 98.19% Date Mon Jul 2 19:10:25 BST 2012 Rank 107 Aligned Residues 109 % Identity 26% Template c3cwbQ_ PDB info PDB header:oxidoreductase Chain: Q: PDB Molecule:mitochondrial cytochrome c1, heme protein; PDBTitle: chicken cytochrome bc1 complex inhibited by an iodinated analogue of2 the polyketide crocacin-d Resolution 3.51 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.																						.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Query Sequence		M	T	E	F	K	A	G	S	A	K	K	G	A	T	L	F	K	T	R	C	L	Q	C	H	T	V	E	K	G	G	P	H	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	P	N	L	H	G	I	F	G	R	H	S	G	Q	A	E	G	Y	S	.	.	.	.	.	.
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	A	L	D	H	S	S	V	R	R	G	F	Q	V	Y	K	Q	V	C	S	A	C	H	S	M	D	Y	V	A	F	R	N	L	I	G	V	T	H	T	E	A	E	A	K	A	L	A	E	E	V	E	V	Q	D	G	P	D	E	N	G	E	L	F	M	R	P	G	K	I	S	D	Y	F	P	K	P	Y	P	N
Template Known Secondary structure		T																		T	T	T	T	T				T	T		B					B	T	T	T	B											T	S								S	S	S									T	T	S	B				S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
													54	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.																.	.	80	.	.	.			.	.	.	.	.	.	90	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.													.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.													.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	Y	T	D	A	N	I	K	K	N	V	L	W	.	.	D	E	N	N	M	S	E	Y	L	T	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	K	Y	I	P	G	.	.	T	K	M	A	F	G	G	L	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.													.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.													.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.									.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	E	A	A	R	A	A	N	N	G	A	L	P	P	D	L	S	Y	I	V	N	A	R	H	G	G	E	D	Y	V	F	S	L	L	T	G	Y	C	D	P	P	A	G	V	V	V	R	E	G	L	H	Y	N	P	Y	F	P	G	Q	A	I	G	M	A	P	P	I	Y	N	E	I	L	E	Y	D	D	G	T	P	A
Template Known Secondary structure								T	T	T	S							S	S					S	T	T	T																T	T					T	T					S	S	S	T	T	S			S	S						T	T	S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	E	K	D	R	N	D	L	I	T	Y	L	K	K	A	C	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	M	S	Q	I	A	K	D	V	C	T	F	L	R	W	A	A	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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