Job Description P00044 Confidence 98.35% Date Mon Jul 2 19:10:25 BST 2012 Rank 105 Aligned Residues 106 % Identity 17% Template c2yiuE_ PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:cytochrome c1, heme protein; PDBTitle: x-ray structure of the dimeric cytochrome bc1 complex from2 the soil bacterium paracoccus denitrificans at 2.73 angstrom resolution Resolution 2.70 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.					.	.	.	.	.	40																								.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	K	A	G	S	A	K	K	G	A	T	L	F	K	T	R	C	L	Q	C	H	T	V	E	K	G	G	P	H	K	V	.	.	.	.	G	P	N	L	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	F	G	R	H	S	G	Q	A	E	G	Y	S	Y	T	D
Query Conservation																																	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	D	Q	H	Q	L	Q	R	G	L	Q	V	Y	T	E	V	C	S	A	C	H	G	L	R	Y	V	P	L	R	T	L	A	D	E	G	G	P	Q	L	P	E	D	Q	V	R	A	Y	A	A	N	F	D	I	T	D	P	E	T	E	E	D	R	P	R	V	P	T	D	H	F	P	T	V	S	G	E	G	M	G	P
Template Known Secondary structure																		T	T	T	T				T	T		B	G	G	G	G	G	S	T	T	S													T	T		B				S	S	S					B			T	T	S	B						S	T	T
Template Predicted Secondary structure
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		57	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.										.	.	.	.	.	80	.	.	.	.			.	.	.				.	.	90	.	.	.										.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.										.	.	.	.	.	.	.	.	.											.	.				.	.	.							.	.	.	.	.	.	.	.	.
Query SS confidence											.	.										.	.	.	.	.	.	.	.	.											.	.				.	.	.							.	.	.	.	.	.	.	.	.
Query Sequence		A	N	I	K	K	N	V	L	W	.	.	D	E	N	N	M	S	E	Y	L	.	.	.	.	.	.	.	.	.	T	N	P	K	K	Y	I	P	G	T	.	.	K	M	A	.	.	.	F	G	G	L	K	K	.	.	.	.	.	.	.	.	.	E	K	D	R	N	D	L	I	T	Y	L	K	K	A	C	E
Query Conservation											.	.										.	.	.	.	.	.	.	.	.											.	.				.	.	.							.	.	.	.	.	.	.	.	.
Alig confidence											.	.										.	.	.	.	.	.	.	.	.											.	.				.	.	.							.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	L	S	L	M	A	K	A	R	I	G	G	P	E	Y	I	H	A	V	L	T	G	Y	D	G	E	E	K	V	L	Y	H	N	A	A	F	A	G	N	W	I	Q	M	A	A	P	L	S	D	D	Q	V	T	Y	E	D	G	T	P	A	T	V	D	Q	M	A	T	D	V	A	A	F	L	M	W	T	A	E
Template Known Secondary structure				T	T																	T		B		S									S	S	S	S	S				S	S						T	T	S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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