Job Description P00044 Confidence 99.44% Date Mon Jul 2 19:10:25 BST 2012 Rank 53 Aligned Residues 85 % Identity 25% Template c2v07A_ PDB info PDB header:photosynthesis Chain: A: PDB Molecule:cytochrome c6; PDBTitle: structure of the arabidopsis thaliana cytochrome c6a v52q2 variant Resolution 1.6 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		S	A	K	K	G	A	T	L	F	K	T	R	C	L	Q	C	H	T	V	E	K	G	G	P	H	K	V	G	P	N	L	H	G	I	F	G	R	H	S	G	Q	A	E	G	Y	S	Y	T	D	A	N	I	K	K	N	V	L	W	D	E	N	N	M	S	E	Y	L	T	N	P	K	K	Y	I	P	G	T	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																											.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.
Template Conservation																											.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	I	Q	R	G	A	T	L	F	N	R	A	C	I	A	C	H	D	T	G	G	N	I	I	Q	.	P	G	A	T	L	F	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	D	L	E	R	N	G	V	D	T	E	E	E	I	Y	R	Q	T	Y	F	G	K	G	R	M	P	G	F	G	E	K
Template Known Secondary structure														T	T	T	T	S	G	G	G			S	S	S	.	T	T			S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T			S												B	T	T	B		B		B	T	T
Template Predicted Secondary structure																											.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.																	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
							85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	K	M	A	F	G	G	L	K	K	E	K	D	R	N	D	L	I	T	Y	L	K	K	A	C	E
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		C	T	P	R	G	Q	C	T	F	G	P	R	L	Q	D	E	E	I	K	L	L	A	E	F	V	K	F	Q	A	D
Template Known Secondary structure				S	G	G	G	B		S	S			B
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions