Job Description P00044 Confidence 98.31% Date Mon Jul 2 19:10:25 BST 2012 Rank 106 Aligned Residues 109 % Identity 28% Template c1p84D_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:cytochrome c1, heme protein; PDBTitle: hdbt inhibited yeast cytochrome bc1 complex Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.																						.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Query Sequence		M	T	E	F	K	A	G	S	A	K	K	G	A	T	L	F	K	T	R	C	L	Q	C	H	T	V	E	K	G	G	P	H	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	P	N	L	H	G	I	F	G	R	H	S	G	Q	A	E	G	Y	S	.	.	.	.	.	.
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation
Template Sequence		F	E	T	F	D	H	A	S	I	R	R	G	Y	Q	V	Y	R	E	V	C	A	A	C	H	S	L	D	R	V	A	W	R	T	L	V	G	V	S	H	T	N	E	E	V	R	N	M	A	E	E	F	E	Y	D	D	E	P	D	E	Q	G	N	P	K	K	R	P	G	K	L	S	D	Y	I	P	G	P	Y	P	N
Template Known Secondary structure		T																		T	G	G	G	T				T	T		B	G	G	G	G	B	T	T	T	B											T	S								T	T	S									T	T	S	B				S		S	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
													54	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.					.	.													.	.	80	.	.	.			.	.	.	.	.	.													90
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.													.	.											.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.							.	.							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.													.	.											.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.							.	.							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	Y	T	D	A	N	I	K	K	N	V	L	W	.	.	D	E	N	N	M	S	E	Y	L	T	.	.	.	.	N	P	.	.	.	.	.	.	.	.	.	.	.	.	K	K	Y	I	P	G	.	.	T	K	M	A	F	G	.	.	.	.	.	.	.	.	.	.	.	.	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.													.	.											.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.							.	.							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.													.	.											.	.	.	.			.	.	.	.	.	.	.	.	.	.	.	.							.	.							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	Q	A	A	R	A	A	N	Q	G	A	L	P	P	D	L	S	L	I	V	K	A	R	H	G	G	C	D	Y	I	F	S	L	L	T	G	Y	P	D	E	P	P	A	G	V	A	L	P	P	G	S	N	Y	N	P	Y	F	P	G	G	S	I	A	M	A	R	V	L	F	D	D	M	V	E	Y	E	D	G	T	P
Template Known Secondary structure								T	T	T	T							S	S	T	T	T	S	S	T	T										T				S	S			T	T					T	T					S	S	S	T	T	S			S							T	T		S			T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	K	E	K	D	R	N	D	L	I	T	Y	L	K	K	A	C	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	T	S	Q	M	A	K	D	V	T	T	F	L	N	W	C	A	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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