Job Description P00044 Confidence 99.07% Date Mon Jul 2 19:10:25 BST 2012
Rank 85 Aligned Residues 88
% Identity 17% Template c1fcdD_
PDB info
PDB header: electron transport(flavocytochrome)Chain: D: PDB Molecule: flavocytochrome c sulfide dehydrogenase
PDBTitle: the structure of flavocytochrome c sulfide dehydrogenase2 from a purple phototrophic bacterium chromatium vinosum at3 2.5 angstroms resolution
Resolution 2.53 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
2 . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . .
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Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
T E F K A G S A K K G A T L F K T R C L Q C H T V E K G G P H K V G P N L H G I F G R H S G Q A E G Y S Y T D A N I K K N V L W D E N N M S E Y L .
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T N P K K
Query Conservation  
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Alig confidence  
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Template Conservation  
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Template Sequence  
Q S F D T A L A D T G A K L H D K Y C E K C H V E G G K P .
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L A D E E D Y H I L A G Q W T P Y L Q Y A M S D F R E E R R P M E
Template Known Secondary structure  
T T T T S G G G G . . . . . . . . . . . . . . . . . . S S S T T T T S S
Template Predicted Secondary structure  
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Template SS confidence  
   
83 . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 .
. . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140 . . . .
 
   
80 . . . . . . .
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Predicted Secondary structure  
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Query SS confidence  
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Query Sequence  
Y I P G T K M A .
F G G L K K E K D R N D L I T Y L K K A
Query Conservation  
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Alig confidence  
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Template Conservation  
                           
Template Sequence  
K K M A S K L R E L L K A E G D A G L D A L F A F Y A S Q
Template Known Secondary structure  
T T G G G G
Template Predicted Secondary structure  
Template SS confidence  
   
145 . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]