Job Description P15891 Confidence 32.43% Date Mon Jul 2 19:13:22 BST 2012 Rank 287 Aligned Residues 41 % Identity 27% Template c3njqB_ PDB info PDB header:viral protein/inhibitor Chain: B: PDB Molecule:orf 17; PDBTitle: crystal structure of kaposi's sarcoma-associated herpesvirus protease2 in complex with dimer disruptor Resolution 2.00 Å

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		539	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.											.	.	.	560	.	.	.	.	.	.	.				.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.												.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.												.	.	.
Query Sequence		A	E	Y	D	Y	D	A	A	E	D	N	E	L	T	F	V	E	N	.	.	.	.	.	.	.	.	.	.	D	K	I	I	N	I	E	F	V	D	D	.	.	.	D	W	W	L	G	E	L	E	K	D	G	S	K	G	L	F
Query Conservation																				.	.	.	.	.	.	.	.	.	.												.	.	.
Alig confidence						.	.													.	.	.	.	.	.	.	.	.	.												.	.	.								.	.
Template Conservation						.	.																																												.	.
Template Sequence		D	V	V	S	.	.	P	K	L	E	Q	E	L	Y	L	D	P	D	Q	V	T	D	Y	L	P	V	T	E	P	L	P	I	T	I	E	H	L	P	E	T	E	V	G	W	T	L	G	L	F	.	.	Q	V	S	H	G	I	F
Template Known Secondary structure						.	.			S	S	S						G	G	G	T	G	G	G			B		S							T	T	B	T	T	B										.	.			T	T
Template Predicted Secondary structure						.	.																																												.	.
Template SS confidence
		12	.	.	.			.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions