Return to main results Retrieve Phyre Job Id

Job DescriptionP15891
Confidence99.69%DateMon Jul 2 19:13:22 BST 2012
Rank28Aligned Residues59
% Identity31%Templatec2ysqA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:rho guanine nucleotide exchange factor 9; PDBTitle: solution structure of the sh3 domain from rho guanine2 nucleotide exchange factor 9
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   531........540.........550.........560.........570.........580.........590.
Predicted Secondary structure 

































Query SS confidence 




























































Query Sequence  PKENPWATAEYDYDAAEDNELTFVENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYVSLG
Query Conservation        
 






 

 



  

 
  

  
  

 
     
  










Alig confidence 












































..













Template Conservation        
 




 
    



  

 
 

      

     ..
  
  
  


  
Template Sequence  GDSIVSAEAVWDHVTMANRELAFKAGDVIKVLDASNKDWWWGQID. . DEEGWFPASFVRLW
Template Known Secondary structure 



SS



SSSSS



TT


SSS
S..S
GGGS
Template Predicted Secondary structure 





















..



Template SS confidence 




























































   7..10.........20.........30.........40.........50. ........60.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions