Job Description P15891 Confidence 22.83% Date Mon Jul 2 19:13:22 BST 2012 Rank 324 Aligned Residues 136 % Identity 10% Template c2x5nA_ PDB info PDB header:nuclear protein Chain: A: PDB Molecule:26s proteasome regulatory subunit rpn10; PDBTitle: crystal structure of the sprpn10 vwa domain Resolution 1.30 Å

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		2	.	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.											.	.	.
Predicted Secondary structure													.													.	.	.																																									.	.	.	.	.	.	.	.	.	.
Query SS confidence													.													.	.	.																																									.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	E	P	I	D	Y	T	T	H	S	.	R	E	I	D	A	E	Y	L	K	I	V	R	.	.	.	G	S	D	P	D	T	T	W	L	I	I	S	P	N	A	K	K	E	Y	E	P	E	S	T	G	S	S	F	H	D	F	L	Q	L	F	D	E	T	K	V	.	.	.	.	.	.	.	.	.	.	Q	Y	G
Query Conservation													.													.	.	.																																									.	.	.	.	.	.	.	.	.	.
Alig confidence													.													.	.	.																																									.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	M	I	N	G	D	Y	I	P	T	R	F	E	A	Q	K	D	T	V	H	M	I	F	N	Q	K	I	N	D	N	P	E	N	M	C	G	L	M	T	I	G	D	N	S	P	Q	V	L	S	T	L	T	R	D	Y	G	K	F	L	S	A	M	H	D	L	P	V	R	G	N	A	K	F	G	D	G	I	Q	I	A
Template Known Secondary structure		G	G	G		T	T	S	S	S																						T	T										T	T	S									S										T	T					S
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		L	A	R	V	S	P	P	G	S	D	V	E	K	I	I	I	I	G	W	C	P	D	S	A	P	L	K	T	R	A	S	F	A	A	N	F	A	A	V	A	N	N	L	F	K	G	Y	H	V	Q	V	T	A	R	D	E	D	D	L	D	.	E	N	E	L	L	M	K	I	S	N	A	A	G	A	R	Y
Query Conservation																																																														.
Alig confidence																															.	.	.	.	.							.																				.
Template Conservation																															.	.	.	.	.							.
Template Sequence		Q	L	A	L	K	H	R	E	N	K	I	Q	R	Q	R	I	V	A	F	V	G	S	P	I	V	E	D	E	K	.	.	.	.	.	N	L	I	R	L	A	.	K	R	M	K	K	N	N	V	A	I	D	I	I	H	I	G	E	L	S	A	L	Q	H	F	I	D	A	A	N	S	S	D	S	C	H	L
Template Known Secondary structure							T		S		T	T	S										S			S	S				.	.	.	.	.							.						T	T									S														S	T	T
Template Predicted Secondary structure																															.	.	.	.	.							.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.						.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions