Return to main results Retrieve Phyre Job Id

Job DescriptionP15891
Confidence99.74%DateMon Jul 2 19:13:22 BST 2012
Rank12Aligned Residues60
% Identity23%Templatec2kymA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:bud emergence protein 1; PDBTitle: solution structure of the bem1p sh3-ci domain from l.elongisporus in2 complex with ste20p peptide
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   533......540.........550.........560.........570..... ....580.........590..
Predicted Secondary structure 
























.







Query SS confidence 










































.
















Query Sequence  ENPWATAEYDYDAAEDNELTFVENDKIINIEFVDDDWWLGELE. KDGSKGLFPSNYVSLGN
Query Conservation      
 






 

 



  

 
  

  
  

 
   .  
  










 
Alig confidence 










































.
















Template Conservation     

 




 
    


   

 
 

      
         
  
 

 



   
Template Sequence  APLFAVTLYEFKAERDDELDVSPGENLSICAHYDYEWFIAKPINRLGGPGLVPVSYVRIID
Template Known Secondary structure 



S
B


STT


B
TT
TTTSSS
S



GGG
Template Predicted Secondary structure 

























Template SS confidence 




























































  
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions