Job Description P15891 Confidence 99.90% Date Mon Jul 2 19:13:22 BST 2012 Rank 6 Aligned Residues 199 % Identity 15% Template c1mv3A_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc Resolution UNK

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		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	K	P	Q	E	P	V	K	A	E	E	A	E	Q	P	K	T	D	Y	K	K	I	G	N	P	L	P	G	M	H	I	E	A	D	N	E	E	E	P	E	E	N	D	D	D	W	D	D	D	E	D	E	A	A	Q	P	P	L	P	S	R	N	V	A	S	G	A	P	V	Q	K	E	E	P	E	Q	E	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	S	P	A	A	T	P	E	I	R	V	N	H	E	P	E	P	A	G	G	A	T	P	G	A	T	L	P	K	S	P	S	Q	L	R	K	G	P	P	V	P	P	P	P	K	H	T	P	S	K	E	V	K	Q	E	Q	I	L	S	L	F	E	D	T	F	V	P	E	I	S	V	T	T	P	S	Q	P	A	E
Template Known Secondary structure																																				S										S
Template Predicted Secondary structure
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	S	L	P	S	R	N	S	I	P	A	P	K	Q	E	E	A	P	E	Q	A	P	E	E	E	I	E	E	E	A	E	E	A	A	P	Q	L	P	S	R	S	S	A	A	P	P	P	P	P	R	R	A	T	P	E	K	K	P	K	E	N	P	W	A	T	A	E	Y	D	Y	D	A	A	E	D	N	E	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	E	V	A	G	G	T	Q	P	A	A	G	A	Q	E	P	G	E	T	A	A	S	E	A	A	S	S	S	L	P	A	V	V	V	E	T	F	P	A	T	V	N	G	T	V	E	G	G	S	G	A	G	R	L	D	L	P	P	G	F	M	F	K	V	Q	A	Q	H	D	Y	T	A	T	D	T	D	E	L	Q
Template Known Secondary structure								S	S																																															S	S			T	T								S	S		B				S	T	T
Template Predicted Secondary structure
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
		553	.	.	.	.	.	.	560	.	.						.	.	.	.	.	.	.	570	.	.	.	.									.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.
Predicted Secondary structure												.	.	.	.	.													.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.													.	.	.	.	.	.	.	.
Query Sequence		F	V	E	N	D	K	I	I	N	I	.	.	.	.	.	E	F	V	D	D	D	W	W	L	G	E	L	.	.	.	.	.	.	.	.	E	K	D	G	S	K	G	L	F	P	S	N	Y	V	S	L	G
Query Conservation												.	.	.	.	.													.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	A	G	D	V	V	L	V	I	P	F	Q	N	P	E	E	Q	D	E	G	W	L	M	G	V	K	E	S	D	W	N	Q	H	K	K	L	E	K	C	R	G	V	F	P	E	N	F	T	E	R	V
Template Known Secondary structure		B		S	S									S		G	G	G	S		T	T												T	G	G	G	G	G	G	T						S	T	T
Template Predicted Secondary structure
Template SS confidence
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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