Phyre 2 alignment of P15891 with d1hh2p1

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Job Description | P15891
Confidence | 34.31% | Date | Mon Jul 2 19:13:22 BST 2012
Rank | 285 | Aligned Residues | 36
% Identity | 8% | Template | d1hh2p1
SCOP info | OB-fold | Nucleic acid-binding proteins | Cold shock DNA-binding domain-like
Resolution | 2.1

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 549 | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . |  | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | N | E | L | T | F | V | E | N | D | K | I | I | N | I | . | E | F | V | D | D | D | W | W | L | G | E | L | E | K | D | G | S | K | G | L | F | P | S | N
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |
Template Sequence |  | E | K | Y | S | E | L | K | G | T | V | T | T | A | E | V | I | R | V | M | G | E | W | A | D | I | R | I | G | . | . | K | L | E | T | R | L | P | K | K
Template Known Secondary structure |  |  |  | T | T |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  | T | . | . | T |  |  |  |  |  |  | G | G
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 128 | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . |  |  | . | . | . | . | 160 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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