Phyre 2 alignment of P15891 with c1w21D_

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Job Description | P15891
Confidence | 32.47% | Date | Mon Jul 2 19:13:22 BST 2012
Rank | 286 | Aligned Residues | 33
% Identity | 15% | Template | c1w21D_
PDB info | PDB header:hydrolase | Chain: D: PDB Molecule:neuraminidase; | PDBTitle: structure of neuraminidase from english duck subtype n62 complexed with 30 mm sialic acid (nana, neu5ac), crystal3 soaked for 43 hours at 291 k.
Resolution | 2.08 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . |  |  | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | I | N | I | E | F | V | D | D | D | W | W | L | G | E | L | . | . | E | K | D | G | S | K | G | L | F | P | S | N | Y | V | S | L | G | N
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | I | V | N | N | Q | N | W | S | G | Y | S | G | A | F | I | D | Y | W | A | N | K | E | C | F | N | P | C | F | Y | V | E | L | I | R
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S | S | S | S | B |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 3402 | . | . | . | . | . | . | . | 3410 | . | . | . | . | . | . | . | . | . | 3420 | . | . | . | . | . | . | . | . | . | 3430 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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