Phyre 2 alignment of P15891 with c2k4kA_

Return to main results | Retrieve Phyre Job Id

Job Description | P15891
Confidence | 46.34% | Date | Mon Jul 2 19:13:22 BST 2012
Rank | 269 | Aligned Residues | 35
% Identity | 14% | Template | c2k4kA_
PDB info | PDB header:rna binding protein | Chain: A: PDB Molecule:general stress protein 13; | PDBTitle: solution structure of gsp13 from bacillus subtilis
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 552 | . | . | . | . | . | . | . | 560 | . | . |  |  | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | T | F | V | E | N | D | K | I | I | N | I | . | . | E | F | V | D | D | D | W | W | L | G | E | L | E | K | D | G | S | K | G | L | F | P | S | N | Y | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  | . |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | F | E | V | G | S | V | Y | T | G | K | V | T | G | L | Q | A | Y | G | A | F | V | A | . | L | D | . | E | E | T | Q | G | L | V | H | I | S | E | V
Template Known Secondary structure |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  | . |  |  | . | T | T |  |  |  |  |  |  | G | G | G | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  | . |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . |  | . | . |  | . | 30 | . | . | . | . | . | . | . | . | . | 40

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions