 |
| Job Description | O74700 | | Confidence | 2.28% | Date | Mon Jul 2 19:10:23 BST 2012 |
| Rank | 58 | Aligned Residues | 45 |
| % Identity | 18% | Template | c1yo7A_ |
| PDB info |
PDB header:replication regulator | Chain: A: PDB Molecule:regulatory protein rop; |
PDBTitle: re-engineering topology of the homodimeric rop protein into2 a single-chain 4-helix bundle
|
| Resolution | 2.80 Å |
|
|   |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
Q | M | K | D | F | M | R | L | Y | S | N | L | V | E | R | C | F | T | D | C | V | N | D | F | T | T | S | K | L | T | N | K | E | Q | T | C | I | M | K | C | S | E | K | F | L | K | H | S | E | R |
| Query Conservation |   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
| Template Sequence |   |
E | Q | A | D | I | C | E | S | L | H | D | H | A | D | E | L | Y | R | S | C | L | A | R | F | G | G | S | K | . |
. |
. |
Q | E | K | T | A | L | N | . |
. |
M | A | R | F | I | R | S | Q | T | L |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |
|  | . | . | . |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . | . |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
64 | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | |
|
|
. | . | . | . | . | . | . | |
|
. | 100 | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|