Job Description O13329 Confidence 99.91% Date Mon Jul 2 19:10:05 BST 2012 Rank 12 Aligned Residues 128 % Identity 8% Template d1hyva_ SCOP info Ribonuclease H-like motif Ribonuclease H-like Retroviral integrase, catalytic domain Resolution 1.70

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		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	F	N	G	E	A	I	E	G	K	Y	S	Y	V	L	L	C	R	D	Y	R	S	S	F	M	W	L	L	P	L	K	S	T	K	F	K	H	L	I	P	V	V	S	S	L	F	L	T	F	A	R	V	P	I	F	V	T	S	S	T	L	D	K	D	D	L	Y	D	I	C	E	E	I	A	S	K	Y	G	L
Query Conservation
Alig confidence													.																																								.	.		.	.	.	.	.																				.	.
Template Conservation													.																																								.	.		.	.	.	.	.																				.	.
Template Sequence		G	I	W	Q	L	D	T	H	L	E	G	.	K	V	I	L	V	A	V	H	V	A	S	G	Y	I	E	A	E	V	I	P	A	E	T	G	Q	E	T	A	Y	F	L	L	K	L	A	G	R	W	P	.	.	V	.	.	.	.	.	K	T	V	H	T	D	N	G	S	N	F	T	S	T	T	V	K	A	A	.	.
Template Known Secondary structure		T									T	T	.									T	T	T									S	S																	S		.	.		.	.	.	.	.						S		G	G	G	G		S							.	.
Template Predicted Secondary structure													.																																								.	.		.	.	.	.	.																				.	.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.						110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340				.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure																		.																	.	.	.
Query SS confidence																		.																	.	.	.
Query Sequence		R	I	G	L	G	L	K	S	S	A	R	F	H	T	G	G	.	I	L	C	I	Q	Y	A	L	N	S	Y	K	K	E	C	L	.	.	.	A	D	W	G	K	C	L	R	Y	G	P	Y	R	F	N	R	R	R	N	K	R	T	K	R	K	P	V	Q	V	L	L	S
Query Conservation																		.																	.	.	.
Alig confidence		.	.	.	.													.																	.	.	.																	.	.
Template Conservation		.	.	.	.																																																	.	.
Template Sequence		.	.	.	.	W	W	A	G	I	K	Q	E	F	G	Q	G	V	I	E	S	M	N	K	E	L	K	K	I	I	G	Q	V	R	D	Q	A	E	H	L	K	T	A	V	Q	M	A	V	F	I	H	N	K	.	.	K	R	K	G	G	Y	S	A	G	E	R	I	V	D
Template Known Secondary structure		.	.	.	.		T	T																										G	G	G	S	S	S															.	.
Template Predicted Secondary structure		.	.	.	.																																																	.	.
Template SS confidence
						131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.	.	.	.	.	.	.	190	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions