Job Description O13329 Confidence 99.86% Date Mon Jul 2 19:10:05 BST 2012 Rank 15 Aligned Residues 130 % Identity 12% Template d1c6va_ SCOP info Ribonuclease H-like motif Ribonuclease H-like Retroviral integrase, catalytic domain Resolution 3.00

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		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	E	R	I	H	I	E	V	F	E	P	F	N	G	E	A	I	E	G	K	Y	S	Y	V	L	L	C	R	D	Y	R	S	S	F	M	W	L	L	P	L	K	S	T	K	F	K	H	L	I	P	V	V	S	S	L	F	L	T	F	A	R	V	P	I	F	V	T	S	S	T	L	D	K	D	D	L	Y	D	I
Query Conservation
Alig confidence												.	.	.	.	.	.					.	.																																								.	.		.	.	.	.	.
Template Conservation												.	.	.	.	.	.					.	.																																								.	.		.	.	.	.	.
Template Sequence		D	L	G	T	W	Q	M	D	C	T	.	.	.	.	.	.	H	L	E	G	.	.	K	I	V	I	V	A	V	H	V	A	S	G	F	I	E	A	E	V	I	P	Q	E	T	G	R	Q	T	A	L	F	L	L	K	L	A	G	R	W	P	.	.	I	.	.	.	.	.	T	H	L	H	T	D	N	G	A	N	F
Template Known Secondary structure			T	T								.	.	.	.	.	.			T	T	.	.									T	T	S									S	S		S													T	T	S		.	.		.	.	.	.	.									S	S	T
Template Predicted Secondary structure												.	.	.	.	.	.					.	.																																								.	.		.	.	.	.	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.							.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110						.	.	.	.	.	.	.	.	.	120	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.				.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.		.	.	.	.	.	.	370	.	.
Predicted Secondary structure																												.																			.	.	.																						.
Query SS confidence																												.																			.	.	.																						.
Query Sequence		C	E	E	I	A	S	K	Y	G	L	R	I	G	L	G	L	K	S	S	A	R	F	H	T	G	G	.	I	L	C	I	Q	Y	A	L	N	S	Y	K	K	E	C	L	A	D	.	.	.	W	G	K	C	L	R	Y	G	P	Y	R	F	N	R	R	R	N	K	R	T	K	.	R	K	P	V	Q	V	L	L	S
Query Conservation																												.																			.	.	.																						.
Alig confidence																.	.	.	.	.	.	.	.	.				.																			.	.	.																						.
Template Conservation																.	.	.	.	.	.	.	.	.
Template Sequence		A	S	Q	E	V	K	M	V	A	W	W	A	G	I	.	.	.	.	.	.	.	.	.	E	H	T	F	G	E	A	M	N	H	H	L	K	N	Q	I	D	R	I	R	E	Q	A	N	S	V	E	T	I	V	L	M	A	V	H	C	M	N	H	K	R	R	G	G	I	G	D	M	T	P	A	E	R	L	I	N
Template Known Secondary structure		T	S	S										T		.	.	.	.	.	.	.	.	.								T	T	T								T	T	T	T	S	S	S															S				S	S	S	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.										.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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