Return to main results Retrieve Phyre Job Id

Job DescriptionO13329
Confidence10.69%DateMon Jul 2 19:10:05 BST 2012
Rank28Aligned Residues10
% Identity20%Templatec1cl4A_
PDB info PDB header:viral proteinChain: A: PDB Molecule:protein (gag polyprotein); PDBTitle: nucleocapsid protein from mason-pfizer monkey virus (mpmv)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   192.......200.
Predicted Secondary structure 






Query SS confidence 









Query Sequence  FCSKCNKKGK
Query Conservation   
  
   
 
Alig confidence 









Template Conservation 




 

 
Template Sequence  LCPRCKRGKH
Template Known Secondary structure  S
SS
SS
SS
Template Predicted Secondary structure 








Template SS confidence 









   52.......60.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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