Job Description O13329 Confidence 98.61% Date Mon Jul 2 19:10:05 BST 2012 Rank 17 Aligned Residues 149 % Identity 13% Template c1bcoA_ PDB info PDB header:transposase Chain: A: PDB Molecule:bacteriophage mu transposase; PDBTitle: bacteriophage mu transposase core domain Resolution 2.40 Å

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		215	.	.	.	.	220	.	.	.	.	.	.							.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.																																		.
Query SS confidence														.	.	.	.	.	.																																		.
Query Sequence		D	K	L	L	P	M	E	R	I	H	I	E	.	.	.	.	.	.	V	F	E	P	F	N	G	E	A	I	E	G	K	Y	S	Y	V	L	L	C	R	D	Y	R	S	S	F	M	W	L	L	P	L	.	K	S	T	K	F	K	H	L	I	P	V	V	S	S	L	F	L	T	F	A	R	V	P	I	F	V	T	S
Query Conservation														.	.	.	.	.	.																																		.
Alig confidence														.	.	.	.	.	.										.	.			.																				.																									.	.	.	.
Template Conservation																													.	.			.																																													.	.	.	.
Template Sequence		E	H	L	D	A	M	Q	W	I	N	G	D	G	Y	L	H	N	V	F	V	R	W	F	N	G	D	V	.	.	I	R	.	P	K	T	W	F	W	Q	D	V	K	T	R	K	I	L	G	W	R	C	D	V	S	E	N	I	D	S	I	R	L	S	F	M	D	V	V	T	R	Y	G	I	P	E	D	.	.	.	.
Template Known Secondary structure						T	T	T										S	B					T	T	S			.	.			.									T	T	T										S	S																					S	S	.	.	.	.
Template Predicted Secondary structure																													.	.			.																																													.	.	.	.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.			.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		288	.	290	.	.	.	.	.	.	.	.	.	300																		.	.	.	.	.	.	.	.	.	310	.	.			.	.	.	.	.	.	.	320	.	.	.	.					.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.													.	.	.	.												.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.													.	.	.	.												.	.	.	.	.	.	.	.	.
Query Sequence		S	T	L	D	K	D	D	L	Y	D	I	C	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	A	S	K	Y	G	L	R	I	G	L	.	.	G	L	K	S	S	A	R	F	H	T	G	G	.	.	.	.	I	L	C	I	Q	Y	A	L	N	S	Y	.	.	.	.	.	.	.	.	.
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.													.	.	.	.												.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.													.	.	.	.												.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	H	I	T	I	D	N	T	R	G	A	A	N	K	W	L	T	G	G	A	P	N	R	Y	R	F	K	V	K	E	D	D	P	K	G	L	F	L	L	M	G	A	K	M	H	W	T	S	V	V	A	G	K	G	W	G	Q	A	K	P	V	E	R	A	F	G	V	G	G	L	E	E	Y	V	D	K	H	P	A	L
Template Known Secondary structure									T	T	S	T	T	T	T	T	T	S				T	T	T	T	B	S		B													T						S	S	S		T	T						S	S		S	S	G	G	G	S	G	G	G	G	G	G	T	T	T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
																336	.	.	.	340		.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	K	E	C	L	.	A	D	W	G	K	C	L	R	Y	G	P	Y	R	F	N	R	R	R	N	K	R	T	K	R	K	P	V	Q	V	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.						.
Template Conservation
Template Sequence		A	G	A	Y	T	G	P	Y	G	D	R	A	V	D	A	E	L	F	L	K	T	L	A	E	G	V	A	M	F	N	A	R	T	G	R	E	T	E	M	C	G	G	K	L	S	F	D	D	V	F
Template Known Secondary structure		T	T	T	B					T	T	T																										S	T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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