Job Description D6W196 Confidence 100.00% Date Mon Jul 2 19:10:02 BST 2012 Rank 1 Aligned Residues 240 % Identity 20% Template d1okca_ SCOP info Mitochondrial carrier Mitochondrial carrier Mitochondrial carrier Resolution 2.2

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	F	I	R	G	F	G	F	F	I	A	G	G	I	S	G	V	I	S	R	T	C	T	A	P	F	D	R	L	K	V	F	L	I	A	R	T	D	L	S	S	I	L	L	N	S	K	T	D	L	L	A	K	N	P	N	A	D	I	N	K	I	S	S	P	L	A	K	A	V	K	S	L	Y	R	Q	G	G	I
Query Conservation
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	Q	A	L	S	F	L	K	D	F	L	A	G	G	V	A	A	A	I	S	K	T	A	V	A	P	I	E	R	V	K	L	L	L	Q	V	Q	H	A	S	K	Q	I	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	Q	Y	K	G	I	I	D	C	V	V	R	I	P	K	E	Q	G	F
Template Known Secondary structure																									T													G	G	G		S	S			G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	S			S														G
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.																.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	F	Y	V	G	N	G	L	N	V	I	K	V	F	P	E	S	S	I	K	F	G	S	F	E	V	T	K	K	I	M	T	K	L	E	G	C	R	D	T	K	D	L	S	K	F	S	T	Y	I	A	G	G	L	A	G	M	A	A	Q	F	S	V	Y	P	I	D	T	L	K	F	R	V	Q	C	A	P	L	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	F	W	R	G	N	L	A	N	V	I	R	Y	F	P	T	Q	A	L	N	F	A	F	K	D	K	Y	K	Q	I	F	L	G	G	V	D	R	H	K	Q	F	W	R	Y	F	A	G	N	L	A	S	G	G	A	A	G	A	T	S	L	C	F	V	Y	P	L	D	F	A	R	T	R	L	A	A	D	V	G	K
Template Known Secondary structure		G	G	G	G	T	T	T																											T	T			T	T	T																																								S
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		382	.	.		.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		T	K	L	.	K	G	N	N	L	L	F	Q	T	A	K	D	M	F	R	E	G	G	G	Q	I	I	L	Q	R	C	H	S	R	Y	S	G	H	I	S	L	C	C	I	R	F	G	D	F	F	C	L	K	K	M	V	Y	C	Q	T	G	K	D	P	E	P	T	T	R	S	G	H	S	K	Q	P	G	C	T	S	N
Query Conservation					.
Alig confidence					.																																																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	A	Q	R	E	F	T	G	L	G	N	C	I	T	K	I	F	K	S	D	G	L	R	G	L	Y	Q	G	F	N	V	S	V	Q	G	I	I	I	Y	R	A	A	Y	F	G	V	Y	D	T	A	K	G	M	.	.	.	.	.	.	.	.	.	.	.	L	P	D	P	K	N	V	H	I	I	V	S	W	M	I
Template Known Secondary structure		S	T	T	T		S		S	S																		T	T	T																									S	.	.	.	.	.	.	.	.	.	.	.	S		G	G	G		S
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200												.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	C	I	Q	W	N	C	R	S	F	C	C	L	S	N	Q	S	F	K	N	K	T	T	S	P	R	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	T	V	T	A	V	A	G	L	V	S	Y	P	F	D	T	V	R	R	R	M	M	M	Q	S	G
Template Known Secondary structure																									T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions