Job Description D6W196 Confidence 99.44% Date Mon Jul 2 19:10:02 BST 2012 Rank 69 Aligned Residues 141 % Identity 15% Template c3ox6C_ PDB info PDB header:calcium binding protein Chain: C: PDB Molecule:calcium-binding protein 1; PDBTitle: crystal structure of the calcium sensor calcium-binding protein 12 (cabp1) Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		K	N	C	E	T	D	K	Q	R	D	I	R	Y	A	C	L	F	K	E	L	D	V	K	G	N	G	Q	V	T	L	D	N	L	I	S	A	F	E	K	N	D	H	P	L	K	G	N	D	E	A	I	K	M	L	F	T	A	M	D	V	N	K	D	S	V	V	D	L	S	D	F	K	K	Y	A	S	N	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																																											.	.																																			.	.	.
Template Conservation																																											.	.
Template Sequence		M	D	R	S	L	R	P	E	E	I	E	E	L	R	E	A	F	R	E	F	D	K	D	K	D	G	Y	I	N	C	R	D	L	G	N	C	M	R	T	M	G	.	.	Y	M	P	T	E	M	E	L	I	E	L	S	Q	Q	I	N	M	N	L	G	G	H	V	D	F	D	D	F	V	E	L	M	G	P	K	L	L
Template Known Secondary structure				S																						S	S	S													T	T	.	.																	T	T	S	T	T
Template Predicted Secondary structure																																											.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
									81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	A	E	S	Q	I	W	N	G	F	Q	R	I	D	L	D	H	D	G	K	I	G	I	N	E	I	N	R	Y	L	S	D	L	D	N	Q	S	I	C	N	N	E	L	N	H	E	L	S	N	E	K	V	N	K	F	S	R	F	F	E	W	A	F	P	K	R	K	A	N	I	A	L	R	G
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	E	T	A	D	M	I	G	V	K	E	L	R	D	A	F	R	E	F	D	T	N	G	D	G	E	I	S	T	S	E	L	R	E	A	M	R	A	L	L	G	H	Q	V	G	H	R	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T																				T	T		S	S	S	B														S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	S	H	K	K	N	T	D	N	D	R	S	K	K	T	T	D	S	D	L	Y	V	T	Y	D	Q	W	R	D	F	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	E	E	I	I	R	D	V	D	L	N	G	D	G	R	V	D	F	E	E	F	V	R	M	M
Template Known Secondary structure		.	.	.	.	.	.	.	.									T	T	S	S	S	S	B									T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions