Job Description D6W196 Confidence 32.77% Date Mon Jul 2 19:10:02 BST 2012 Rank 254 Aligned Residues 144 % Identity 17% Template c3bq3A_ PDB info PDB header:cell cycle, ligase Chain: A: PDB Molecule:defective in cullin neddylation protein 1; PDBTitle: crystal structure of s. cerevisiae dcn1 Resolution 1.90 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		I	R	Y	A	C	L	F	K	E	L	D	V	K	G	N	G	Q	V	T	L	D	N	L	I	S	A	F	E	K	N	D	H	P	L	K	G	N	D	E	A	I	K	M	L	F	T	A	M	D	V	N	K	D	S	.	V	V	D	L	S	D	F	K	K	Y	A	S	N	A	E	S	Q	I	W	N	G	F	Q	R	I
Query Conservation																																																								.
Alig confidence															.	.																								.	.															.																		.	.	.	.	.	.	.	.
Template Conservation															.	.																								.	.																																	.	.	.	.	.	.	.	.
Template Sequence		K	E	L	T	Q	V	F	E	H	Y	I	N	N	.	.	N	L	F	D	I	D	S	L	V	K	F	I	E	E	L	G	Y	N	L	E	D	L	A	.	.	T	L	C	L	A	H	L	L	G	Y	K	K	L	E	E	P	L	K	R	E	D	F	L	S	T	W	F	X	Q	G	C	S	.	.	.	.	.	.	.	.
Template Known Secondary structure													B	T	.	.	T	B														T			T	T				.	.								T	T		S		T	T	S														T	T			.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.																								.	.																																	.	.	.	.	.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.					.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.														.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.														.	.	.	.	.	.	.	.	.
Query Sequence		D	L	D	H	D	G	K	I	G	I	N	E	I	N	R	Y	L	S	D	L	D	N	Q	S	I	C	N	N	E	L	N	H	E	L	S	N	E	K	V	N	K	F	S	R	F	F	E	W	A	F	P	K	R	K	.	.	.	.	A	N	I	A	L	R	G	Q	A	S	H	K	K	.	.	.	.	.	.	.	.	.
Query Conservation																																																								.	.	.	.														.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.														.	.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	T	I	S	D	X	Q	E	C	I	K	T	L	D	V	K	L	H	E	D	L	Q	Y	.	.	.	.	.	.	.	.	.	.	.	F	T	Q	I	Y	N	Y	A	F	N	L	I	L	D	P	N	R	K	D	I	D	T	D	E	G	I	Q	Y	W	K	L	F	F	Q	P	E	Y	P	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	S																						.	.	.	.	.	.	.	.	.	.	.															T	T		S															T	S	T	T	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
										141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.												.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
							160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	N	T	D	N	D	R	S	K	K	T	T	D	S	D	L	Y	V	T	Y	D	Q	W	R	D	F	L	L	L	V
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		R	X	E	P	D	L	L	E	A	W	F	R	F	L	R	D	E	G	K	T	T	I	S	K	D	T	W	R	X	L	L	L	F	F
Template Known Secondary structure																			T
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions