Job Description D6W196 Confidence 99.67% Date Mon Jul 2 19:10:02 BST 2012 Rank 24 Aligned Residues 137 % Identity 14% Template c3a8rB_ PDB info PDB header:calcium binding protein Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: the structure of the n-terminal regulatory domain of a plant nadph2 oxidase Resolution 2.40 Å

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		16	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80						.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.																																																								.	.	.	.	.
Query SS confidence												.																																																								.	.	.	.	.
Query Sequence		Y	A	C	L	F	K	E	L	D	V	.	K	G	N	G	Q	V	T	L	D	N	L	I	S	A	F	E	K	N	D	H	P	L	K	G	N	D	E	A	I	K	M	L	F	T	A	M	D	V	N	K	D	S	V	V	D	L	S	D	F	K	K	Y	A	S	N	.	.	.	.	.	A	E	S	Q	I	W	N	G	F
Query Conservation												.																																																								.	.	.	.	.
Alig confidence												.																											.	.																												.	.	.	.	.
Template Conservation																																							.	.
Template Sequence		W	A	A	V	E	K	R	F	N	Q	L	Q	V	D	G	V	L	L	R	S	R	F	G	K	C	I	G	M	D	G	S	D	E	F	A	V	Q	.	.	M	F	D	S	L	A	R	K	R	G	I	V	K	Q	V	L	T	K	D	E	L	K	D	F	Y	E	Q	L	T	D	Q	G	F	D	N	R	L	R	T	F	F
Template Known Secondary structure														B	T	T	B			G	G	G						T			S								.	.										T			S	S
Template Predicted Secondary structure																																							.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.			.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	I	D	L	D	H	D	G	K	I	G	I	N	E	I	N	R	Y	L	S	D	L	D	N	Q	S	I	C	N	N	E	L	N	H	E	L	S	N	E	K	V	N	K	F	S	R	F	F	E	W	A	F	P	K	R	K	A	N	I	A	L	R	G	Q	A	S	H	K	K	N	T	D	N	D	R	S	K	K	T
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	M	V	D	K	N	A	D	G	R	L	T	A	E	E	V	K	E	I	I	A	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	A	N	K	L	S	K	I	K	E	R	A	D	E	Y	T	A	L	I	M	E	E	L	D
Template Known Secondary structure						T	T		S	S															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.																																	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	S	D	L	Y	V	T	Y	D	Q	W	R	D	F	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	T	N	L	G	Y	I	E	M	E	D	L	E	A	L	L	L
Template Known Secondary structure		T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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