 |
| Job Description | D6W196 | | Confidence | 99.17% | Date | Mon Jul 2 19:10:02 BST 2012 |
| Rank | 110 | Aligned Residues | 83 |
| % Identity | 17% | Template | c2vtgA_ |
| PDB info |
PDB header:metal-binding protein | Chain: A: PDB Molecule:ionized calcium-binding adapter molecule 2; |
PDBTitle: crystal structure of human iba2, trigonal crystal form
|
| Resolution | 2.45 Å |
|
 |
|   |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | K | N | C | E | T | D | K | Q | R | D | I | R | Y | A | C | L | F | K | E | L | D | V | K | G | N | G | Q | V | T | L | D | N | L | I | S | A | F | E | K | N | D | H | P | L | K | G | N | D | E | A | I | K | M | L | F | T | A | M | D | V | N | K | D | S | V | V | D | L | S | D | F | K | K | Y | A | S | N | A | E |
| Query Conservation |   |
|   |   |   |
|   |   |   |   |
|
|   |
|   |   |   |
|
|   |   |
|
|   |
|   |
|
|   |
|
|   |   |
|
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |
|   |   |
|   |
|   |   |   |
|
|   |   |   |
|   |   |
|
|   |   |   |
|   |   |
| . | . |
|   |   |   |   |   |   |   |
|   |
|   |   |
|   |
|   |   |   |
|
|   |   |   |
|   |   |
|   |
| Template Sequence |   |
Y | S | D | E | E | N | L | P | E | K | L | T | A | F | K | E | K | Y | M | E | F | D | L | N | N | E | G | E | I | D | L | M | S | L | K | R | M | M | E | K | L | G | V | P | K | T | H | L | E | . |
. |
M | K | K | M | I | S | E | V | T | G | G | V | S | D | T | I | S | Y | R | D | F | V | N | M | M | L | G | K | R |
| Template Known Secondary structure |   |
G | T | T |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
|
| T | T | S |
| B |
|  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|
|  |  |  | . | . |  |  |  |  |  |  |  |  |  | T | T | S |
| S | S | B |
|  |  |  |  |  |  |  |  |  |
| S | S |
| Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
39 | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | |
|
. | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . |
|   |
|   |   |
83 | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
| Query Sequence |   |
S | Q | I | W | N |
| Query Conservation |   |
  |   |
|   |   |
| Alig confidence |   |
|
|
|
|
|
| Template Conservation |   |
  |   |   |
|   |
| Template Sequence |   |
S | A | V | L | K |
| Template Known Secondary structure |   |
|
|  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|   |   |
117 | . | . | 120 | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|