Job Description D6W196 Confidence 20.85% Date Mon Jul 2 19:10:02 BST 2012 Rank 260 Aligned Residues 89 % Identity 9% Template c2rjbD_ PDB info PDB header:structural genomics, unknown function Chain: D: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of uncharacterized protein ydcj (sf1787)2 from shigella flexneri which includes domain duf1338.3 northeast structural genomics consortium target sfr276 Resolution 2.60 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.									.	.
Query SS confidence																																																										.									.	.
Query Sequence		L	D	N	L	I	S	A	F	E	K	N	D	H	P	L	K	G	N	D	E	A	I	K	M	L	F	T	A	M	D	V	N	K	D	S	V	V	D	L	S	D	F	K	K	Y	A	S	N	A	E	S	Q	I	W	N	G	.	F	Q	R	I	D	L	D	H	.	.	D	G	K	I	G	I	N	E	I	N	R	Y	L
Query Conservation																																																										.									.	.
Alig confidence																																																										.									.	.
Template Conservation
Template Sequence		R	Q	L	L	E	E	Y	E	Q	Q	G	G	F	N	E	T	Q	A	Q	E	F	V	Q	E	A	L	E	T	F	R	W	H	Q	L	A	T	V	D	E	E	T	Y	R	A	L	H	N	E	H	R	L	I	A	D	V	V	C	F	P	G	C	H	I	N	H	L	T	P	R	T	L	D	I	D	R	V	Q	S	X	X
Template Known Secondary structure												S	S			T	T									T	G	G	G	G	S			S	B		S	S										T	T									S	S	S	S				S					B		S		T	T					S	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	L	D	N	Q	S	I	C	N	N	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	E	C	G	I	E	P	K	I	L	I	E
Template Known Secondary structure		G	G	G	T			B		S			B
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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